Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SNORD77B-201ENST00000391112 67 ntBASIC0.56□□□□□ -2.32
VTNP04004 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.56□□□□□ -2.32
VTNP04004 AC002350.1-201ENST00000490759 375 ntBASIC0.56□□□□□ -2.32
VTNP04004 RN7SKP19-201ENST00000516016 252 ntBASIC0.56□□□□□ -2.32
VTNP04004 U7.2-201ENST00000607576 63 ntBASIC0.56□□□□□ -2.32
VTNP04004 U6.109-201ENST00000636749 87 ntBASIC0.56□□□□□ -2.32
VTNP04004 MIR18A-201ENST00000362310 71 ntBASIC0.55□□□□□ -2.32
VTNP04004 RNU6-235P-201ENST00000362644 107 ntBASIC0.55□□□□□ -2.32
VTNP04004 RNA5SP133-201ENST00000363368 119 ntBASIC0.55□□□□□ -2.32
VTNP04004 Y_RNA.205-201ENST00000364128 113 ntBASIC0.55□□□□□ -2.32
VTNP04004 RNU6-647P-201ENST00000364243 107 ntBASIC0.55□□□□□ -2.32
VTNP04004 AC096949.1-201ENST00000412047 152 ntBASIC0.55□□□□□ -2.32
VTNP04004 RNU7-137P-201ENST00000516788 62 ntBASIC0.55□□□□□ -2.32
VTNP04004 RNU7-6P-201ENST00000516845 62 ntBASIC0.55□□□□□ -2.32
VTNP04004 IGKV1-22-201ENST00000524313 326 ntBASIC0.55□□□□□ -2.32
VTNP04004 AL359881.1-201ENST00000602916 267 ntBASIC0.55□□□□□ -2.32
VTNP04004 Y_RNA.42-201ENST00000362660 108 ntBASIC0.54□□□□□ -2.32
VTNP04004 MIR759-201ENST00000390224 91 ntBASIC0.54□□□□□ -2.32
VTNP04004 RNU6-1061P-201ENST00000516530 99 ntBASIC0.54□□□□□ -2.32
VTNP04004 RNU6-531P-201ENST00000516694 104 ntBASIC0.54□□□□□ -2.32
VTNP04004 Y_RNA.697-201ENST00000516776 113 ntBASIC0.54□□□□□ -2.32
VTNP04004 MTND5P34-201ENST00000568888 325 ntBASIC0.54□□□□□ -2.32
VTNP04004 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.54□□□□□ -2.32
VTNP04004 SNORD114-23-201ENST00000363536 72 ntBASIC0.53□□□□□ -2.32
VTNP04004 SNORA40-201ENST00000388090 126 ntBASIC0.53□□□□□ -2.32
VTNP04004 SNORD100-201ENST00000408573 76 ntBASIC0.53□□□□□ -2.32
VTNP04004 MTND4LP9-201ENST00000427694 174 ntBASIC0.53□□□□□ -2.32
VTNP04004 AL158147.1-201ENST00000443970 75 ntBASIC0.53□□□□□ -2.32
VTNP04004 RNU6-1211P-201ENST00000459179 105 ntBASIC0.53□□□□□ -2.32
VTNP04004 MIR1270-201ENST00000459320 83 ntBASIC0.53□□□□□ -2.32
VTNP04004 RNU6-1194P-201ENST00000516208 104 ntBASIC0.53□□□□□ -2.32
VTNP04004 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
VTNP04004 RNU6-1212P-201ENST00000517023 104 ntBASIC0.53□□□□□ -2.32
VTNP04004 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.53□□□□□ -2.32
VTNP04004 TUG1_4.1-201ENST00000619464 181 ntBASIC0.53□□□□□ -2.32
VTNP04004 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VTNP04004 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
VTNP04004 RNU6-774P-201ENST00000363238 107 ntBASIC0.52□□□□□ -2.33
VTNP04004 SNORD114-10-201ENST00000363409 72 ntBASIC0.52□□□□□ -2.33
VTNP04004 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
VTNP04004 Y_RNA.506-201ENST00000384494 102 ntBASIC0.52□□□□□ -2.33
VTNP04004 MIR644A-201ENST00000385262 94 ntBASIC0.52□□□□□ -2.33
VTNP04004 MIR140-201ENST00000385282 100 ntBASIC0.52□□□□□ -2.33
VTNP04004 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
VTNP04004 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
VTNP04004 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
VTNP04004 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.52□□□□□ -2.33
VTNP04004 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
VTNP04004 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
VTNP04004 MIR3678-201ENST00000578455 94 ntBASIC0.52□□□□□ -2.33
VTNP04004 RNU4-58P-201ENST00000363192 141 ntBASIC0.51□□□□□ -2.33
VTNP04004 Y_RNA.119-201ENST00000363301 96 ntBASIC0.51□□□□□ -2.33
VTNP04004 Y_RNA.448-201ENST00000384185 108 ntBASIC0.51□□□□□ -2.33
VTNP04004 RNU6-616P-201ENST00000384353 107 ntBASIC0.51□□□□□ -2.33
VTNP04004 RNU6-535P-201ENST00000384722 107 ntBASIC0.51□□□□□ -2.33
VTNP04004 MIR548I1-201ENST00000408810 149 ntBASIC0.51□□□□□ -2.33
VTNP04004 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.51□□□□□ -2.33
VTNP04004 RNU6-469P-201ENST00000516253 101 ntBASIC0.51□□□□□ -2.33
VTNP04004 RNU6-781P-201ENST00000516377 101 ntBASIC0.51□□□□□ -2.33
VTNP04004 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
VTNP04004 MIR101-2-201ENST00000362195 79 ntBASIC0.5□□□□□ -2.33
VTNP04004 Y_RNA.213-201ENST00000364178 111 ntBASIC0.5□□□□□ -2.33
VTNP04004 Y_RNA.528-201ENST00000384575 108 ntBASIC0.5□□□□□ -2.33
VTNP04004 Y_RNA.536-201ENST00000384621 113 ntBASIC0.5□□□□□ -2.33
VTNP04004 Y_RNA.568-201ENST00000384742 113 ntBASIC0.5□□□□□ -2.33
VTNP04004 MIR206-201ENST00000384872 86 ntBASIC0.5□□□□□ -2.33
VTNP04004 RNU6-1321P-201ENST00000390905 107 ntBASIC0.5□□□□□ -2.33
VTNP04004 RNU6-257P-201ENST00000410238 98 ntBASIC0.5□□□□□ -2.33
VTNP04004 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
VTNP04004 AC138749.4-201ENST00000563970 127 ntBASIC0.5□□□□□ -2.33
VTNP04004 RNU4-45P-201ENST00000365469 141 ntBASIC0.49□□□□□ -2.33
VTNP04004 MT-TI-201ENST00000387365 69 ntBASIC0.49□□□□□ -2.33
VTNP04004 AP003327.1-201ENST00000529684 127 ntBASIC0.49□□□□□ -2.33
VTNP04004 MIR4500-201ENST00000579472 76 ntBASIC0.49□□□□□ -2.33
VTNP04004 MIR3133-201ENST00000583157 78 ntBASIC0.49□□□□□ -2.33
VTNP04004 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
VTNP04004 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
VTNP04004 Y_RNA.32-201ENST00000362589 110 ntBASIC0.48□□□□□ -2.33
VTNP04004 RNU6-865P-201ENST00000364772 107 ntBASIC0.48□□□□□ -2.33
VTNP04004 RNY1P5-201ENST00000383890 115 ntBASIC0.48□□□□□ -2.33
VTNP04004 RNU6-291P-201ENST00000384720 107 ntBASIC0.48□□□□□ -2.33
VTNP04004 MIR193B-201ENST00000384907 83 ntBASIC0.48□□□□□ -2.33
VTNP04004 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
VTNP04004 RNA5SP136-201ENST00000410906 107 ntBASIC0.48□□□□□ -2.33
VTNP04004 RNU7-2P-201ENST00000516096 62 ntBASIC0.48□□□□□ -2.33
VTNP04004 SNORA31.14-201ENST00000516728 116 ntBASIC0.48□□□□□ -2.33
VTNP04004 MIR3163-201ENST00000581592 73 ntBASIC0.48□□□□□ -2.33
VTNP04004 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
VTNP04004 AC092634.7-201ENST00000621022 103 ntBASIC0.48□□□□□ -2.33
VTNP04004 AC010487.4-201ENST00000637027 61 ntBASIC0.48□□□□□ -2.33
VTNP04004 Y_RNA.98-201ENST00000363109 102 ntBASIC0.47□□□□□ -2.33
VTNP04004 Y_RNA.198-201ENST00000364013 98 ntBASIC0.47□□□□□ -2.33
VTNP04004 Y_RNA.567-201ENST00000384736 106 ntBASIC0.47□□□□□ -2.33
VTNP04004 RNU7-48P-201ENST00000458875 63 ntBASIC0.47□□□□□ -2.33
VTNP04004 RNU6-971P-201ENST00000516920 106 ntBASIC0.47□□□□□ -2.33
VTNP04004 AC025166.1-201ENST00000612411 163 ntBASIC0.47□□□□□ -2.33
VTNP04004 AC087741.2-201ENST00000619415 172 ntBASIC0.47□□□□□ -2.33
VTNP04004 Y_RNA.174-201ENST00000363781 105 ntBASIC0.46□□□□□ -2.34
VTNP04004 RNY1P2-201ENST00000364820 117 ntBASIC0.46□□□□□ -2.34
VTNP04004 RNA5SP94-201ENST00000516917 108 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 288.9 ms