Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
GPC4O75487 RNA5SP436-201ENST00000516020 115 ntBASIC0.53□□□□□ -2.32
GPC4O75487 RNU7-200P-201ENST00000516105 62 ntBASIC0.53□□□□□ -2.32
GPC4O75487 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
GPC4O75487 RNU7-6P-201ENST00000516845 62 ntBASIC0.53□□□□□ -2.32
GPC4O75487 MIR7111-201ENST00000619751 72 ntBASIC0.53□□□□□ -2.32
GPC4O75487 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
GPC4O75487 RNU6-616P-201ENST00000384353 107 ntBASIC0.52□□□□□ -2.33
GPC4O75487 MIR598-201ENST00000384868 97 ntBASIC0.52□□□□□ -2.33
GPC4O75487 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
GPC4O75487 RNU6-1307P-201ENST00000391012 103 ntBASIC0.52□□□□□ -2.33
GPC4O75487 RNU4-69P-201ENST00000410677 143 ntBASIC0.52□□□□□ -2.33
GPC4O75487 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
GPC4O75487 AC092628.1-201ENST00000436250 252 ntBASIC0.52□□□□□ -2.33
GPC4O75487 RNU6-781P-201ENST00000516377 101 ntBASIC0.52□□□□□ -2.33
GPC4O75487 RNU6-1061P-201ENST00000516530 99 ntBASIC0.52□□□□□ -2.33
GPC4O75487 Y_RNA.32-201ENST00000362589 110 ntBASIC0.51□□□□□ -2.33
GPC4O75487 SNORD18A-201ENST00000363753 72 ntBASIC0.51□□□□□ -2.33
GPC4O75487 Y_RNA.180-201ENST00000363867 113 ntBASIC0.51□□□□□ -2.33
GPC4O75487 Y_RNA.448-201ENST00000384185 108 ntBASIC0.51□□□□□ -2.33
GPC4O75487 RNU6-535P-201ENST00000384722 107 ntBASIC0.51□□□□□ -2.33
GPC4O75487 RNU6-1321P-201ENST00000390905 107 ntBASIC0.51□□□□□ -2.33
GPC4O75487 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.51□□□□□ -2.33
GPC4O75487 RNU6-1211P-201ENST00000459179 105 ntBASIC0.51□□□□□ -2.33
GPC4O75487 RN7SKP19-201ENST00000516016 252 ntBASIC0.51□□□□□ -2.33
GPC4O75487 SNORA31.14-201ENST00000516728 116 ntBASIC0.51□□□□□ -2.33
GPC4O75487 RNA5SP94-201ENST00000516917 108 ntBASIC0.51□□□□□ -2.33
GPC4O75487 AP003327.1-201ENST00000529684 127 ntBASIC0.51□□□□□ -2.33
GPC4O75487 AC138749.4-201ENST00000563970 127 ntBASIC0.51□□□□□ -2.33
GPC4O75487 uc_338.16-201ENST00000621804 95 ntBASIC0.51□□□□□ -2.33
GPC4O75487 SNORA63.5-201ENST00000363548 123 ntBASIC0.5□□□□□ -2.33
GPC4O75487 RNA5SP517-201ENST00000364724 117 ntBASIC0.5□□□□□ -2.33
GPC4O75487 Y_RNA.525-201ENST00000384570 113 ntBASIC0.5□□□□□ -2.33
GPC4O75487 Y_RNA.567-201ENST00000384736 106 ntBASIC0.5□□□□□ -2.33
GPC4O75487 RNU6-735P-201ENST00000410612 107 ntBASIC0.5□□□□□ -2.33
GPC4O75487 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
GPC4O75487 SNORA25.18-201ENST00000607153 114 ntBASIC0.5□□□□□ -2.33
GPC4O75487 AP001340.1-201ENST00000624405 217 ntBASIC0.5□□□□□ -2.33
GPC4O75487 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
GPC4O75487 Y_RNA.119-201ENST00000363301 96 ntBASIC0.49□□□□□ -2.33
GPC4O75487 RNA5SP245-201ENST00000364239 121 ntBASIC0.49□□□□□ -2.33
GPC4O75487 Y_RNA.464-201ENST00000384282 110 ntBASIC0.49□□□□□ -2.33
GPC4O75487 RNU6-291P-201ENST00000384720 107 ntBASIC0.49□□□□□ -2.33
GPC4O75487 MIR206-201ENST00000384872 86 ntBASIC0.49□□□□□ -2.33
GPC4O75487 SNORD77B-201ENST00000391112 67 ntBASIC0.49□□□□□ -2.33
GPC4O75487 MTND4LP9-201ENST00000427694 174 ntBASIC0.49□□□□□ -2.33
GPC4O75487 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
GPC4O75487 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
GPC4O75487 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
GPC4O75487 MIR4500-201ENST00000579472 76 ntBASIC0.49□□□□□ -2.33
GPC4O75487 AC092634.7-201ENST00000621022 103 ntBASIC0.49□□□□□ -2.33
GPC4O75487 MIR101-2-201ENST00000362195 79 ntBASIC0.48□□□□□ -2.33
GPC4O75487 Y_RNA.506-201ENST00000384494 102 ntBASIC0.48□□□□□ -2.33
GPC4O75487 Y_RNA.536-201ENST00000384621 113 ntBASIC0.48□□□□□ -2.33
GPC4O75487 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
GPC4O75487 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.48□□□□□ -2.33
GPC4O75487 Y_RNA.773-201ENST00000607168 90 ntBASIC0.48□□□□□ -2.33
GPC4O75487 PVT1_3.1-201ENST00000620853 95 ntBASIC0.48□□□□□ -2.33
GPC4O75487 SNORD114-10-201ENST00000363409 72 ntBASIC0.47□□□□□ -2.33
GPC4O75487 SNORA36.1-201ENST00000363424 132 ntBASIC0.47□□□□□ -2.33
GPC4O75487 Y_RNA.343-201ENST00000365354 112 ntBASIC0.47□□□□□ -2.33
GPC4O75487 RNU6-257P-201ENST00000410238 98 ntBASIC0.47□□□□□ -2.33
GPC4O75487 BX276092.1-201ENST00000427368 251 ntBASIC0.47□□□□□ -2.33
GPC4O75487 RNU6-469P-201ENST00000516253 101 ntBASIC0.47□□□□□ -2.33
GPC4O75487 RNU6-971P-201ENST00000516920 106 ntBASIC0.47□□□□□ -2.33
GPC4O75487 RNU6-1212P-201ENST00000517023 104 ntBASIC0.47□□□□□ -2.33
GPC4O75487 MIR3133-201ENST00000583157 78 ntBASIC0.47□□□□□ -2.33
GPC4O75487 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
GPC4O75487 RNU4-58P-201ENST00000363192 141 ntBASIC0.46□□□□□ -2.34
GPC4O75487 RNY1P2-201ENST00000364820 117 ntBASIC0.46□□□□□ -2.34
GPC4O75487 Y_RNA.299-201ENST00000364973 94 ntBASIC0.46□□□□□ -2.34
GPC4O75487 Y_RNA.528-201ENST00000384575 108 ntBASIC0.46□□□□□ -2.34
GPC4O75487 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
GPC4O75487 SUMO1P3-201ENST00000439961 304 ntBASIC0.46□□□□□ -2.34
GPC4O75487 AL158147.1-201ENST00000443970 75 ntBASIC0.46□□□□□ -2.34
GPC4O75487 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.46□□□□□ -2.34
GPC4O75487 U7.2-201ENST00000607576 63 ntBASIC0.46□□□□□ -2.34
GPC4O75487 Y_RNA.49-201ENST00000362714 112 ntBASIC0.45□□□□□ -2.34
GPC4O75487 RNU6-647P-201ENST00000364243 107 ntBASIC0.45□□□□□ -2.34
GPC4O75487 Y_RNA.280-201ENST00000364765 112 ntBASIC0.45□□□□□ -2.34
GPC4O75487 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
GPC4O75487 MIR1255B1-201ENST00000636325 63 ntBASIC0.45□□□□□ -2.34
GPC4O75487 RNU6-187P-201ENST00000384139 106 ntBASIC0.44□□□□□ -2.34
GPC4O75487 Y_RNA.568-201ENST00000384742 113 ntBASIC0.44□□□□□ -2.34
GPC4O75487 SNORA40-201ENST00000388090 126 ntBASIC0.44□□□□□ -2.34
GPC4O75487 SNORA7.5-201ENST00000410672 110 ntBASIC0.44□□□□□ -2.34
GPC4O75487 Y_RNA.630-201ENST00000411370 108 ntBASIC0.44□□□□□ -2.34
GPC4O75487 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
GPC4O75487 RNU7-48P-201ENST00000458875 63 ntBASIC0.44□□□□□ -2.34
GPC4O75487 RNU7-107P-201ENST00000459121 61 ntBASIC0.44□□□□□ -2.34
GPC4O75487 RNU7-2P-201ENST00000516096 62 ntBASIC0.44□□□□□ -2.34
GPC4O75487 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
GPC4O75487 RNU6-1234P-201ENST00000516877 103 ntBASIC0.44□□□□□ -2.34
GPC4O75487 AC087741.2-201ENST00000619415 172 ntBASIC0.44□□□□□ -2.34
GPC4O75487 RNU6-865P-201ENST00000364772 107 ntBASIC0.43□□□□□ -2.34
GPC4O75487 SNORA8.2-201ENST00000384372 139 ntBASIC0.43□□□□□ -2.34
GPC4O75487 MIR518A1-201ENST00000385068 85 ntBASIC0.43□□□□□ -2.34
GPC4O75487 MIR613-201ENST00000385248 95 ntBASIC0.43□□□□□ -2.34
GPC4O75487 MIR548I1-201ENST00000408810 149 ntBASIC0.43□□□□□ -2.34
GPC4O75487 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 273.8 ms