Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC107399.1-201ENST00000451226 265 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 RNU7-48P-201ENST00000458875 63 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 AL445984.1-201ENST00000637834 659 ntBASIC-1.15□□□□□ -2.59
USH2AO75445 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.16□□□□□ -2.59
USH2AO75445 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.16□□□□□ -2.59
USH2AO75445 MIR4293-201ENST00000584305 78 ntBASIC-1.16□□□□□ -2.59
USH2AO75445 RNU6-192P-201ENST00000391253 100 ntBASIC-1.16□□□□□ -2.59
USH2AO75445 AC137499.1-201ENST00000427602 88 ntBASIC-1.16□□□□□ -2.59
USH2AO75445 snoU13.17-201ENST00000458802 104 ntBASIC-1.16□□□□□ -2.59
USH2AO75445 RNU7-35P-201ENST00000517174 62 ntBASIC-1.16□□□□□ -2.59
USH2AO75445 RNU6-744P-201ENST00000365557 107 ntBASIC-1.16□□□□□ -2.6
USH2AO75445 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.16□□□□□ -2.6
USH2AO75445 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.16□□□□□ -2.6
USH2AO75445 AL021921.1-201ENST00000442774 93 ntBASIC-1.16□□□□□ -2.6
USH2AO75445 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.16□□□□□ -2.6
USH2AO75445 RNA5SP224-201ENST00000365069 126 ntBASIC-1.16□□□□□ -2.6
USH2AO75445 AC018638.8-201ENST00000588755 281 ntBASIC-1.16□□□□□ -2.6
USH2AO75445 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 AC092747.3-201ENST00000603769 301 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 AC122108.2-201ENST00000611946 526 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU6-801P-201ENST00000364087 105 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU6-159P-201ENST00000391080 106 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU6-607P-201ENST00000411283 108 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 U6.81-201ENST00000612550 106 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 AC072046.2-201ENST00000618366 268 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU6-664P-201ENST00000362381 107 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 SNORD63.2-201ENST00000516303 64 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 MIR4724-201ENST00000579485 89 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU6-938P-201ENST00000411285 103 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU7-80P-201ENST00000459562 61 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 U6.115-201ENST00000636045 103 ntBASIC-1.17□□□□□ -2.6
USH2AO75445 MIR202-201ENST00000362219 110 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 RNU6-318P-201ENST00000384283 103 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 AC062037.1-201ENST00000605302 128 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 JPX_2.1-201ENST00000614161 69 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 SNORA33.1-201ENST00000364957 130 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 RNU6-520P-201ENST00000384717 104 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 MTND3P25-201ENST00000509243 135 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 MTND2P31-201ENST00000512602 616 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 AC006254.2-201ENST00000603259 279 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 AL022161.1-201ENST00000604390 213 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 AL138825.1-201ENST00000618587 192 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 AC087741.2-201ENST00000619415 172 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 MIR410-201ENST00000362222 80 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 SNORD115-30-201ENST00000364117 82 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 RNU6-601P-201ENST00000384540 107 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 RNU6-129P-201ENST00000391022 107 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 SNORA17.4-201ENST00000391287 132 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 AP002782.1-201ENST00000623107 614 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 MIR429-201ENST00000362106 83 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 MIR342-201ENST00000362212 99 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 SNORD36C-201ENST00000516733 66 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 AL512427.1-201ENST00000618593 349 ntBASIC-1.18□□□□□ -2.6
USH2AO75445 RNU6-598P-201ENST00000364017 105 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 SNORD38.2-201ENST00000384470 69 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 RNU6-518P-201ENST00000516056 96 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 AC006566.1-201ENST00000608943 513 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
USH2AO75445 SNORA36B-201ENST00000410438 131 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 ELOCP17-201ENST00000414751 326 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 MIR4666A-201ENST00000580160 79 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 AC026741.1-201ENST00000605892 482 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 SNORD36A-201ENST00000362874 73 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 RNU6-289P-201ENST00000364093 107 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 RNU6-728P-201ENST00000365375 104 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 RNA5SP147-201ENST00000516493 109 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 AC138915.2-201ENST00000569776 97 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 TRDV1-202ENST00000621643 102 ntBASIC-1.19□□□□□ -2.6
USH2AO75445 MIR1278-201ENST00000408753 81 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 RNU6-651P-201ENST00000411040 105 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 RNU6-62P-201ENST00000516526 102 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.2□□□□□ -2.6
USH2AO75445 RNU6-660P-201ENST00000364566 109 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 RNU6-946P-201ENST00000383878 107 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 CHEK2P4-201ENST00000450340 246 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 RNU7-149P-201ENST00000516739 59 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 MTATP6P24-201ENST00000576835 677 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 MIR4696-201ENST00000581431 70 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 MIR6739-201ENST00000622461 75 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 AC022140.2-201ENST00000623500 188 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 RNA5SP144-201ENST00000410846 116 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 RNU7-113P-201ENST00000459273 62 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 U2.7-201ENST00000619197 100 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 AL606534.2-204ENST00000635008 178 ntBASIC-1.2□□□□□ -2.6
USH2AO75445 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.21□□□□□ -2.6
USH2AO75445 SNORD67.1-201ENST00000516618 108 ntBASIC-1.21□□□□□ -2.6
USH2AO75445 MIR4773-1-201ENST00000637203 78 ntBASIC-1.21□□□□□ -2.6
USH2AO75445 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.21□□□□□ -2.6
USH2AO75445 RNU6-827P-201ENST00000365553 106 ntBASIC-1.21□□□□□ -2.6
USH2AO75445 SNORD70.1-201ENST00000391007 85 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms