Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RNU6-535P-201ENST00000384722 107 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 MIRLET7F2-201ENST00000385277 83 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 MT-TI-201ENST00000387365 69 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
ZNF253O75346 MIR1276-201ENST00000408707 83 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 RNU7-48P-201ENST00000458875 63 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 RNA5SP272-201ENST00000516095 111 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 RNU7-2P-201ENST00000516096 62 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 RNU6-469P-201ENST00000516253 101 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 AC087741.2-201ENST00000619415 172 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 AC092634.7-201ENST00000621022 103 ntBASIC0.38□□□□□ -2.35
ZNF253O75346 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
ZNF253O75346 RNA5SP517-201ENST00000364724 117 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 SNORD114-22-201ENST00000365423 72 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 Y_RNA.448-201ENST00000384185 108 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 RNU6-616P-201ENST00000384353 107 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 MIR644A-201ENST00000385262 94 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 SNORA40-201ENST00000388090 126 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 RNU6-679P-201ENST00000391003 106 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 RNU6-257P-201ENST00000410238 98 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
ZNF253O75346 Y_RNA.56-201ENST00000362798 112 ntBASIC0.36□□□□□ -2.35
ZNF253O75346 SNORD115-35-201ENST00000365122 82 ntBASIC0.36□□□□□ -2.35
ZNF253O75346 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
ZNF253O75346 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
ZNF253O75346 RNU6-1307P-201ENST00000391012 103 ntBASIC0.36□□□□□ -2.35
ZNF253O75346 RNU6-346P-201ENST00000516288 111 ntBASIC0.36□□□□□ -2.35
ZNF253O75346 MIR101-2-201ENST00000362195 79 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 Y_RNA.98-201ENST00000363109 102 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 SNORD58C-201ENST00000365223 64 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 MIR1263-201ENST00000408324 86 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 SNORA40.8-201ENST00000411034 126 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
ZNF253O75346 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 RNU6-781P-201ENST00000516377 101 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 RNU7-6P-201ENST00000516845 62 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 MIR6504-201ENST00000613520 61 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 AP001362.1-201ENST00000625165 124 ntBASIC0.35□□□□□ -2.35
ZNF253O75346 Y_RNA.127-201ENST00000363386 109 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 SNORA36.1-201ENST00000363424 132 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 Y_RNA.528-201ENST00000384575 108 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 MT-TR-201ENST00000387439 65 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 MIR759-201ENST00000390224 91 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 AC092628.1-201ENST00000436250 252 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 RPS29P1-201ENST00000465274 159 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 RNA5SP47-201ENST00000517230 109 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 MIR4714-201ENST00000580728 77 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 MIR4639-201ENST00000584938 69 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 MIR6828-201ENST00000636181 60 ntBASIC0.34□□□□□ -2.36
ZNF253O75346 RNA5SP245-201ENST00000364239 121 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 RNU6-865P-201ENST00000364772 107 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 Y_RNA.328-201ENST00000365208 113 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 MIR539-201ENST00000365690 78 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 SNORD28-201ENST00000384706 75 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 SNORD71-201ENST00000411292 86 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 AC114737.2-201ENST00000421583 173 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 AC244505.6-201ENST00000452829 130 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 Y_RNA.703-201ENST00000516846 111 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 RNU6-1234P-201ENST00000516877 103 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 SCARNA16.5-201ENST00000517114 183 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 MIR548H5-201ENST00000580314 60 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 Y_RNA.773-201ENST00000607168 90 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 MIR376B-201ENST00000614515 100 ntBASIC0.33□□□□□ -2.36
ZNF253O75346 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
ZNF253O75346 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 RNA5SP347-201ENST00000362445 119 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 RNU6-235P-201ENST00000362644 107 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 SNORA63.5-201ENST00000363548 123 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 Y_RNA.191-201ENST00000363972 113 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 RNA5SP499-201ENST00000363982 119 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 RNU6-1229P-201ENST00000364295 107 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 SNORD50.2-201ENST00000365465 70 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 RNU6-1062P-201ENST00000383908 107 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 MIR548D2-201ENST00000384955 97 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 Y_RNA.586-201ENST00000391146 98 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 RNU6-735P-201ENST00000410612 107 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 AC098934.3-201ENST00000430450 190 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.32□□□□□ -2.36
ZNF253O75346 SNORA25.18-201ENST00000607153 114 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 RNU7-10P-201ENST00000607194 63 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 AC025166.1-201ENST00000612411 163 ntBASIC0.32□□□□□ -2.36
ZNF253O75346 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
ZNF253O75346 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
ZNF253O75346 RNU6-772P-201ENST00000516042 105 ntBASIC0.31□□□□□ -2.36
ZNF253O75346 RNA5SP268-201ENST00000516828 124 ntBASIC0.31□□□□□ -2.36
ZNF253O75346 AC138869.1-201ENST00000568623 124 ntBASIC0.31□□□□□ -2.36
ZNF253O75346 MIR4452-201ENST00000583004 71 ntBASIC0.31□□□□□ -2.36
ZNF253O75346 MIR8070-201ENST00000616510 88 ntBASIC0.31□□□□□ -2.36
ZNF253O75346 MIR6788-201ENST00000618842 66 ntBASIC0.31□□□□□ -2.36
ZNF253O75346 RNU6-746P-201ENST00000384112 109 ntBASIC0.3□□□□□ -2.36
ZNF253O75346 MIR216A-201ENST00000385063 110 ntBASIC0.3□□□□□ -2.36
ZNF253O75346 MIR548I2-201ENST00000408348 149 ntBASIC0.3□□□□□ -2.36
ZNF253O75346 MIR548J-201ENST00000408833 112 ntBASIC0.3□□□□□ -2.36
ZNF253O75346 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.3□□□□□ -2.36
ZNF253O75346 MIR4500-201ENST00000579472 76 ntBASIC0.3□□□□□ -2.36
ZNF253O75346 AC244669.1-204ENST00000621564 178 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms