Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 MIR3129-201ENST00000581095 76 ntBASIC-1.72□□□□□ -2.69
SIPA1L3O60292 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.73□□□□□ -2.69
SIPA1L3O60292 AL353691.2-201ENST00000443795 59 ntBASIC-1.73□□□□□ -2.69
SIPA1L3O60292 AC084782.3-201ENST00000612282 578 ntBASIC-1.73□□□□□ -2.69
SIPA1L3O60292 AC124864.2-201ENST00000624736 186 ntBASIC-1.73□□□□□ -2.69
SIPA1L3O60292 AP001362.1-201ENST00000625165 124 ntBASIC-1.73□□□□□ -2.69
SIPA1L3O60292 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 SNORD115-22-201ENST00000364456 82 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 RNU6-54P-201ENST00000365563 107 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 RNU6-80P-201ENST00000384195 107 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 RNU6-21P-201ENST00000384710 107 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 RNU6-168P-201ENST00000516189 101 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 RNU6-273P-201ENST00000516937 96 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 RNU6-762P-201ENST00000517107 102 ntBASIC-1.74□□□□□ -2.69
SIPA1L3O60292 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-102P-201ENST00000384485 104 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 SEPT14P3-201ENST00000439401 183 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 AL732372.2-207ENST00000445840 183 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 SEPT14P2-201ENST00000453405 183 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 SNORD54-201ENST00000459159 67 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU7-169P-201ENST00000459456 61 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 AC108019.1-201ENST00000512540 175 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 SEPT14P4-201ENST00000513445 186 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-720P-201ENST00000516363 108 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-764P-201ENST00000516396 105 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-980P-201ENST00000516925 103 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-850P-201ENST00000516934 103 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 FO082796.1-201ENST00000523795 183 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 MIR6863-201ENST00000636112 90 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 SNORD27-201ENST00000363981 72 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 MT-TT-201ENST00000387460 66 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 PMCHL1-202ENST00000423102 261 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.75□□□□□ -2.69
SIPA1L3O60292 FGF7P6-202ENST00000451282 293 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 MIR1270-201ENST00000459320 83 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 FGF7P4-201ENST00000509595 295 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 RNU6-307P-201ENST00000516743 106 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 AC084781.2-201ENST00000615568 161 ntBASIC-1.75□□□□□ -2.69
SIPA1L3O60292 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 AC009161.1-201ENST00000417306 376 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 RNU6-719P-201ENST00000516671 104 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 RNU6-232P-201ENST00000517144 64 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 CYP3A54P-201ENST00000566950 75 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 MIR5197-201ENST00000583721 112 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 AC108081.1-201ENST00000604358 221 ntBASIC-1.76□□□□□ -2.69
SIPA1L3O60292 RNU6-79P-201ENST00000362511 107 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 RNY4-201ENST00000516507 96 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 AC133104.2-201ENST00000615272 193 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
SIPA1L3O60292 SNORA26.8-201ENST00000391306 124 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 MTATP6P19-201ENST00000413797 659 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 RNA5SP153-201ENST00000516498 76 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 RNU7-110P-201ENST00000516891 62 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 NBR2-204ENST00000587322 63 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 DEFB117-201ENST00000602356 141 ntBASIC-1.77□□□□□ -2.69
SIPA1L3O60292 RNU6-695P-201ENST00000391157 104 ntBASIC-1.78□□□□□ -2.69
SIPA1L3O60292 RNA5SP144-201ENST00000410846 116 ntBASIC-1.78□□□□□ -2.69
SIPA1L3O60292 AC090616.4-201ENST00000448026 115 ntBASIC-1.78□□□□□ -2.69
SIPA1L3O60292 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.78□□□□□ -2.69
SIPA1L3O60292 AL365205.2-201ENST00000594586 68 ntBASIC-1.78□□□□□ -2.69
SIPA1L3O60292 PISRT1.1-201ENST00000616930 107 ntBASIC-1.78□□□□□ -2.69
SIPA1L3O60292 MIR664B-201ENST00000626756 61 ntBASIC-1.78□□□□□ -2.69
SIPA1L3O60292 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 MIR487B-201ENST00000385021 84 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 RNU6-400P-201ENST00000391173 106 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 U3.27-201ENST00000391237 200 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 SNORD42B-201ENST00000458893 67 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 RPS29P25-201ENST00000481709 171 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 RNU6-864P-201ENST00000516256 108 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 RNU6-264P-201ENST00000517134 104 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 MIR4790-201ENST00000577799 79 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 AC097639.2-201ENST00000603159 172 ntBASIC-1.79□□□□□ -2.7
SIPA1L3O60292 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.8□□□□□ -2.7
SIPA1L3O60292 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 RNU7-2P-201ENST00000516096 62 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 MIR4756-201ENST00000577874 78 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 MIR376B-201ENST00000614515 100 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
SIPA1L3O60292 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 SNORD115-19-201ENST00000363098 82 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 SNORD115-18-201ENST00000363293 82 ntBASIC-1.8□□□□□ -2.7
SIPA1L3O60292 RNU6-957P-201ENST00000363652 99 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms