Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 MIR6082-201ENST00000613604 109 ntBASIC0.8□□□□□ -2.28
NCK2O43639 SNORA32-201ENST00000384072 121 ntBASIC0.79□□□□□ -2.28
NCK2O43639 RNU6-426P-201ENST00000516464 97 ntBASIC0.79□□□□□ -2.28
NCK2O43639 MIR4711-201ENST00000578274 70 ntBASIC0.79□□□□□ -2.28
NCK2O43639 MIR3612-201ENST00000579753 87 ntBASIC0.79□□□□□ -2.28
NCK2O43639 RNU6-403P-201ENST00000363163 104 ntBASIC0.78□□□□□ -2.28
NCK2O43639 Y_RNA.506-201ENST00000384494 102 ntBASIC0.78□□□□□ -2.28
NCK2O43639 SNORA40-201ENST00000388090 126 ntBASIC0.78□□□□□ -2.28
NCK2O43639 MIR759-201ENST00000390224 91 ntBASIC0.78□□□□□ -2.28
NCK2O43639 AC096949.1-201ENST00000412047 152 ntBASIC0.78□□□□□ -2.28
NCK2O43639 AL158147.1-201ENST00000443970 75 ntBASIC0.78□□□□□ -2.28
NCK2O43639 RN7SKP19-201ENST00000516016 252 ntBASIC0.78□□□□□ -2.28
NCK2O43639 RNU7-137P-201ENST00000516788 62 ntBASIC0.78□□□□□ -2.28
NCK2O43639 AC008608.1-201ENST00000603910 127 ntBASIC0.78□□□□□ -2.28
NCK2O43639 MIR8087-201ENST00000612745 78 ntBASIC0.78□□□□□ -2.28
NCK2O43639 AL109933.3-201ENST00000619095 188 ntBASIC0.78□□□□□ -2.28
NCK2O43639 MIR330-201ENST00000362196 94 ntBASIC0.77□□□□□ -2.29
NCK2O43639 RNA5SP117-201ENST00000365294 118 ntBASIC0.77□□□□□ -2.29
NCK2O43639 Y_RNA.433-201ENST00000384089 102 ntBASIC0.77□□□□□ -2.29
NCK2O43639 Y_RNA.568-201ENST00000384742 113 ntBASIC0.77□□□□□ -2.29
NCK2O43639 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
NCK2O43639 AC002350.1-201ENST00000490759 375 ntBASIC0.77□□□□□ -2.29
NCK2O43639 Y_RNA.13-201ENST00000362403 112 ntBASIC0.76□□□□□ -2.29
NCK2O43639 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
NCK2O43639 MIR18A-201ENST00000362310 71 ntBASIC0.75□□□□□ -2.29
NCK2O43639 RNU4-58P-201ENST00000363192 141 ntBASIC0.75□□□□□ -2.29
NCK2O43639 Y_RNA.174-201ENST00000363781 105 ntBASIC0.75□□□□□ -2.29
NCK2O43639 Y_RNA.213-201ENST00000364178 111 ntBASIC0.75□□□□□ -2.29
NCK2O43639 MIR539-201ENST00000365690 78 ntBASIC0.75□□□□□ -2.29
NCK2O43639 RNA5SP193-201ENST00000410353 107 ntBASIC0.75□□□□□ -2.29
NCK2O43639 Y_RNA.617-201ENST00000410920 90 ntBASIC0.75□□□□□ -2.29
NCK2O43639 SNORD67.1-201ENST00000516618 108 ntBASIC0.75□□□□□ -2.29
NCK2O43639 RNU6-135P-201ENST00000516769 101 ntBASIC0.75□□□□□ -2.29
NCK2O43639 MIR3163-201ENST00000581592 73 ntBASIC0.75□□□□□ -2.29
NCK2O43639 Y_RNA.198-201ENST00000364013 98 ntBASIC0.74□□□□□ -2.29
NCK2O43639 Y_RNA.258-201ENST00000364613 105 ntBASIC0.74□□□□□ -2.29
NCK2O43639 SNORD50.2-201ENST00000365465 70 ntBASIC0.74□□□□□ -2.29
NCK2O43639 RNU6-1062P-201ENST00000383908 107 ntBASIC0.74□□□□□ -2.29
NCK2O43639 SNORA72.6-201ENST00000384520 129 ntBASIC0.74□□□□□ -2.29
NCK2O43639 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.74□□□□□ -2.29
NCK2O43639 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.74□□□□□ -2.29
NCK2O43639 RNA5SP257-201ENST00000363023 116 ntBASIC0.73□□□□□ -2.29
NCK2O43639 RNY1P2-201ENST00000364820 117 ntBASIC0.73□□□□□ -2.29
NCK2O43639 MIR140-201ENST00000385282 100 ntBASIC0.73□□□□□ -2.29
NCK2O43639 MTND4LP9-201ENST00000427694 174 ntBASIC0.73□□□□□ -2.29
NCK2O43639 AC018659.1-201ENST00000551083 169 ntBASIC0.73□□□□□ -2.29
NCK2O43639 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.73□□□□□ -2.29
NCK2O43639 Y_RNA.703-201ENST00000516846 111 ntBASIC0.72□□□□□ -2.29
NCK2O43639 IGKV1-22-201ENST00000524313 326 ntBASIC0.72□□□□□ -2.29
NCK2O43639 RNA5SP133-201ENST00000363368 119 ntBASIC0.71□□□□□ -2.3
NCK2O43639 SNORA36.2-201ENST00000384004 127 ntBASIC0.71□□□□□ -2.3
NCK2O43639 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
NCK2O43639 RNU6-733P-201ENST00000410759 104 ntBASIC0.71□□□□□ -2.3
NCK2O43639 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
NCK2O43639 AC092628.1-201ENST00000436250 252 ntBASIC0.71□□□□□ -2.3
NCK2O43639 RNU6-469P-201ENST00000516253 101 ntBASIC0.71□□□□□ -2.3
NCK2O43639 DEFB131E-201ENST00000532329 154 ntBASIC0.71□□□□□ -2.3
NCK2O43639 AC022523.2-201ENST00000561045 150 ntBASIC0.71□□□□□ -2.3
NCK2O43639 AC243829.3-201ENST00000622177 108 ntBASIC0.71□□□□□ -2.3
NCK2O43639 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
NCK2O43639 SNORD115-19-201ENST00000363098 82 ntBASIC0.7□□□□□ -2.3
NCK2O43639 SNORD115-18-201ENST00000363293 82 ntBASIC0.7□□□□□ -2.3
NCK2O43639 SNORD115-17-201ENST00000364612 82 ntBASIC0.7□□□□□ -2.3
NCK2O43639 RNU6-746P-201ENST00000384112 109 ntBASIC0.7□□□□□ -2.3
NCK2O43639 RNU6-1104P-201ENST00000384723 104 ntBASIC0.7□□□□□ -2.3
NCK2O43639 MIR1270-201ENST00000459320 83 ntBASIC0.7□□□□□ -2.3
NCK2O43639 AL359881.1-201ENST00000602916 267 ntBASIC0.7□□□□□ -2.3
NCK2O43639 uc_338.16-201ENST00000621804 95 ntBASIC0.7□□□□□ -2.3
NCK2O43639 MIR5087-201ENST00000635826 76 ntBASIC0.7□□□□□ -2.3
NCK2O43639 Y_RNA.98-201ENST00000363109 102 ntBASIC0.69□□□□□ -2.3
NCK2O43639 Y_RNA.536-201ENST00000384621 113 ntBASIC0.69□□□□□ -2.3
NCK2O43639 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.69□□□□□ -2.3
NCK2O43639 RNU6-257P-201ENST00000410238 98 ntBASIC0.69□□□□□ -2.3
NCK2O43639 SNORA25.16-201ENST00000516741 121 ntBASIC0.69□□□□□ -2.3
NCK2O43639 Y_RNA.697-201ENST00000516776 113 ntBASIC0.69□□□□□ -2.3
NCK2O43639 AC138749.4-201ENST00000563970 127 ntBASIC0.69□□□□□ -2.3
NCK2O43639 U6.109-201ENST00000636749 87 ntBASIC0.69□□□□□ -2.3
NCK2O43639 Y_RNA.294-201ENST00000364916 102 ntBASIC0.68□□□□□ -2.3
NCK2O43639 RNU6-716P-201ENST00000365621 103 ntBASIC0.68□□□□□ -2.3
NCK2O43639 RNU6-429P-201ENST00000384582 108 ntBASIC0.68□□□□□ -2.3
NCK2O43639 MIR206-201ENST00000384872 86 ntBASIC0.68□□□□□ -2.3
NCK2O43639 MIRLET7F2-201ENST00000385277 83 ntBASIC0.68□□□□□ -2.3
NCK2O43639 MT-TR-201ENST00000387439 65 ntBASIC0.68□□□□□ -2.3
NCK2O43639 RNU7-48P-201ENST00000458875 63 ntBASIC0.68□□□□□ -2.3
NCK2O43639 RNU7-2P-201ENST00000516096 62 ntBASIC0.68□□□□□ -2.3
NCK2O43639 RN7SKP12-201ENST00000516275 143 ntBASIC0.68□□□□□ -2.3
NCK2O43639 RNU6-346P-201ENST00000516288 111 ntBASIC0.68□□□□□ -2.3
NCK2O43639 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.68□□□□□ -2.3
NCK2O43639 MIR1263-201ENST00000408324 86 ntBASIC0.67□□□□□ -2.3
NCK2O43639 RNU7-6P-201ENST00000516845 62 ntBASIC0.67□□□□□ -2.3
NCK2O43639 RNU7-10P-201ENST00000607194 63 ntBASIC0.67□□□□□ -2.3
NCK2O43639 MIR101-2-201ENST00000362195 79 ntBASIC0.66□□□□□ -2.3
NCK2O43639 Y_RNA.119-201ENST00000363301 96 ntBASIC0.66□□□□□ -2.3
NCK2O43639 Y_RNA.346-201ENST00000365385 112 ntBASIC0.66□□□□□ -2.3
NCK2O43639 Y_RNA.528-201ENST00000384575 108 ntBASIC0.66□□□□□ -2.3
NCK2O43639 RNA5SP272-201ENST00000516095 111 ntBASIC0.66□□□□□ -2.3
NCK2O43639 RNA5SP395-201ENST00000516567 118 ntBASIC0.66□□□□□ -2.3
NCK2O43639 RNU6-531P-201ENST00000516694 104 ntBASIC0.66□□□□□ -2.3
NCK2O43639 MIR3678-201ENST00000578455 94 ntBASIC0.66□□□□□ -2.3
NCK2O43639 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms