Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU7-48P-201ENST00000458875 63 ntBASIC1.33□□□□□ -2.2
PROM1O43490 SCARNA23-201ENST00000516060 130 ntBASIC1.33□□□□□ -2.2
PROM1O43490 AC096720.1-201ENST00000604441 183 ntBASIC1.33□□□□□ -2.2
PROM1O43490 uc_338.6-201ENST00000613544 171 ntBASIC1.33□□□□□ -2.2
PROM1O43490 AL442128.1-201ENST00000615151 90 ntBASIC1.33□□□□□ -2.2
PROM1O43490 AP001318.4-201ENST00000616637 121 ntBASIC1.33□□□□□ -2.2
PROM1O43490 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.33□□□□□ -2.2
PROM1O43490 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
PROM1O43490 MIR30D-201ENST00000362283 70 ntBASIC1.32□□□□□ -2.2
PROM1O43490 MIR34C-201ENST00000384831 77 ntBASIC1.32□□□□□ -2.2
PROM1O43490 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
PROM1O43490 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-910P-201ENST00000390844 107 ntBASIC1.32□□□□□ -2.2
PROM1O43490 SNORA75.2-201ENST00000391138 150 ntBASIC1.32□□□□□ -2.2
PROM1O43490 SNORA75.3-201ENST00000391231 150 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-447P-201ENST00000410293 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-1118P-201ENST00000410382 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-1076P-201ENST00000410397 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-355P-201ENST00000410427 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-791P-201ENST00000410467 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 Y_RNA.601-201ENST00000410500 113 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-705P-201ENST00000410601 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-1100P-201ENST00000410691 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-860P-201ENST00000410860 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-1217P-201ENST00000411276 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RNU6-785P-201ENST00000411324 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 MRPL35P3-201ENST00000421557 364 ntBASIC1.32□□□□□ -2.2
PROM1O43490 SNORA40.13-201ENST00000516379 120 ntBASIC1.32□□□□□ -2.2
PROM1O43490 U6.90-201ENST00000614007 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 RMST_2.1-201ENST00000617263 136 ntBASIC1.32□□□□□ -2.2
PROM1O43490 Y_RNA.818-201ENST00000618813 71 ntBASIC1.32□□□□□ -2.2
PROM1O43490 U6.70-201ENST00000620287 104 ntBASIC1.32□□□□□ -2.2
PROM1O43490 Y_RNA.98-201ENST00000363109 102 ntBASIC1.31□□□□□ -2.2
PROM1O43490 Y_RNA.107-201ENST00000363190 121 ntBASIC1.31□□□□□ -2.2
PROM1O43490 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
PROM1O43490 SNORD114-22-201ENST00000365423 72 ntBASIC1.31□□□□□ -2.2
PROM1O43490 Y_RNA.540-201ENST00000384638 111 ntBASIC1.31□□□□□ -2.2
PROM1O43490 MT-TF-201ENST00000387314 71 ntBASIC1.31□□□□□ -2.2
PROM1O43490 RNY4P30-201ENST00000410216 95 ntBASIC1.31□□□□□ -2.2
PROM1O43490 AL591704.2-201ENST00000421658 181 ntBASIC1.31□□□□□ -2.2
PROM1O43490 UBL5P1-201ENST00000507979 193 ntBASIC1.31□□□□□ -2.2
PROM1O43490 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
PROM1O43490 RNA5SP170-201ENST00000517150 101 ntBASIC1.31□□□□□ -2.2
PROM1O43490 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
PROM1O43490 AC023827.1-201ENST00000569247 97 ntBASIC1.31□□□□□ -2.2
PROM1O43490 MIR376B-201ENST00000614515 100 ntBASIC1.31□□□□□ -2.2
PROM1O43490 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
PROM1O43490 Y_RNA.168-201ENST00000363740 102 ntBASIC1.3□□□□□ -2.2
PROM1O43490 SNORD45B-201ENST00000364617 72 ntBASIC1.3□□□□□ -2.2
PROM1O43490 Y_RNA.348-201ENST00000365403 103 ntBASIC1.3□□□□□ -2.2
PROM1O43490 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
PROM1O43490 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
PROM1O43490 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.3□□□□□ -2.2
PROM1O43490 RNU6-795P-201ENST00000516323 103 ntBASIC1.3□□□□□ -2.2
PROM1O43490 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
PROM1O43490 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
PROM1O43490 Y_RNA.377-201ENST00000365644 108 ntBASIC1.29□□□□□ -2.2
PROM1O43490 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
PROM1O43490 U8.15-201ENST00000390947 134 ntBASIC1.29□□□□□ -2.2
PROM1O43490 SNORD83.1-201ENST00000411362 77 ntBASIC1.29□□□□□ -2.2
PROM1O43490 snoU13.21-201ENST00000459368 105 ntBASIC1.29□□□□□ -2.2
PROM1O43490 AC012676.2-201ENST00000619258 186 ntBASIC1.29□□□□□ -2.2
PROM1O43490 AP001362.1-201ENST00000625165 124 ntBASIC1.29□□□□□ -2.2
PROM1O43490 U6.109-201ENST00000636749 87 ntBASIC1.29□□□□□ -2.2
PROM1O43490 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
PROM1O43490 RNU6-1298P-201ENST00000362456 101 ntBASIC1.28□□□□□ -2.2
PROM1O43490 Y_RNA.36-201ENST00000362602 112 ntBASIC1.28□□□□□ -2.2
PROM1O43490 Y_RNA.247-201ENST00000364500 92 ntBASIC1.28□□□□□ -2.2
PROM1O43490 RNU6-580P-201ENST00000365159 107 ntBASIC1.28□□□□□ -2.2
PROM1O43490 RNU6-53P-201ENST00000365367 106 ntBASIC1.28□□□□□ -2.2
PROM1O43490 RNU6-905P-201ENST00000384434 107 ntBASIC1.28□□□□□ -2.2
PROM1O43490 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
PROM1O43490 SNORD93-201ENST00000408813 74 ntBASIC1.28□□□□□ -2.2
PROM1O43490 MIR18B-201ENST00000454574 71 ntBASIC1.28□□□□□ -2.2
PROM1O43490 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
PROM1O43490 AC012531.4-201ENST00000616509 177 ntBASIC1.28□□□□□ -2.2
PROM1O43490 AC023934.1-201ENST00000574529 2389 ntBASIC1.28□□□□□ -2.2
PROM1O43490 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
PROM1O43490 RNU6-170P-201ENST00000362832 104 ntBASIC1.27□□□□□ -2.21
PROM1O43490 Y_RNA.93-201ENST00000363066 109 ntBASIC1.27□□□□□ -2.21
PROM1O43490 RNA5SP133-201ENST00000363368 119 ntBASIC1.27□□□□□ -2.21
PROM1O43490 RNU6-640P-201ENST00000363693 105 ntBASIC1.27□□□□□ -2.21
PROM1O43490 SNORD38.1-201ENST00000363863 68 ntBASIC1.27□□□□□ -2.21
PROM1O43490 SNORD38.2-201ENST00000384470 69 ntBASIC1.27□□□□□ -2.21
PROM1O43490 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
PROM1O43490 SPINT5P-201ENST00000448174 155 ntBASIC1.27□□□□□ -2.21
PROM1O43490 Y_RNA.694-201ENST00000516677 117 ntBASIC1.27□□□□□ -2.21
PROM1O43490 SNORA70.22-201ENST00000517160 124 ntBASIC1.27□□□□□ -2.21
PROM1O43490 MTND5P40-201ENST00000559945 246 ntBASIC1.27□□□□□ -2.21
PROM1O43490 AC091304.10-201ENST00000641554 121 ntBASIC1.27□□□□□ -2.21
PROM1O43490 RNU6-403P-201ENST00000363163 104 ntBASIC1.26□□□□□ -2.21
PROM1O43490 RNU6-934P-201ENST00000365154 107 ntBASIC1.26□□□□□ -2.21
PROM1O43490 SNORA72.6-201ENST00000384520 129 ntBASIC1.26□□□□□ -2.21
PROM1O43490 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.26□□□□□ -2.21
PROM1O43490 RNU6-994P-201ENST00000410507 111 ntBASIC1.26□□□□□ -2.21
PROM1O43490 AC015818.7-201ENST00000428754 109 ntBASIC1.26□□□□□ -2.21
PROM1O43490 MTATP8P2-201ENST00000435212 202 ntBASIC1.26□□□□□ -2.21
PROM1O43490 AC087499.7-201ENST00000441958 109 ntBASIC1.26□□□□□ -2.21
PROM1O43490 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
PROM1O43490 RNU7-21P-201ENST00000459430 62 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms