Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 RNU6-690P-201ENST00000365242 106 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 AC113195.1-201ENST00000579952 141 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 MIR4744-201ENST00000581563 82 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 MIR6507-201ENST00000613630 70 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 uc_338.10-201ENST00000621872 182 ntBASIC-0.68□□□□□ -2.52
UPK1AO00322 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.69□□□□□ -2.52
UPK1AO00322 MIR548I2-201ENST00000408348 149 ntBASIC-0.69□□□□□ -2.52
UPK1AO00322 RNU7-48P-201ENST00000458875 63 ntBASIC-0.69□□□□□ -2.52
UPK1AO00322 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
UPK1AO00322 MIR3920-201ENST00000581751 86 ntBASIC-0.69□□□□□ -2.52
UPK1AO00322 U2.14-201ENST00000615943 113 ntBASIC-0.69□□□□□ -2.52
UPK1AO00322 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.69□□□□□ -2.52
UPK1AO00322 MIR101-1-201ENST00000362265 75 ntBASIC-0.7□□□□□ -2.52
UPK1AO00322 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.7□□□□□ -2.52
UPK1AO00322 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.7□□□□□ -2.52
UPK1AO00322 RNU1-141P-201ENST00000364623 158 ntBASIC-0.7□□□□□ -2.52
UPK1AO00322 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.7□□□□□ -2.52
UPK1AO00322 RNU6-735P-201ENST00000410612 107 ntBASIC-0.7□□□□□ -2.52
UPK1AO00322 RNU7-188P-201ENST00000517063 64 ntBASIC-0.7□□□□□ -2.52
UPK1AO00322 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.7□□□□□ -2.52
UPK1AO00322 MIR655-201ENST00000362159 97 ntBASIC-0.71□□□□□ -2.52
UPK1AO00322 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.71□□□□□ -2.52
UPK1AO00322 RNA5SP205-201ENST00000364653 136 ntBASIC-0.71□□□□□ -2.52
UPK1AO00322 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.71□□□□□ -2.52
UPK1AO00322 RNU7-195P-201ENST00000458793 62 ntBASIC-0.71□□□□□ -2.52
UPK1AO00322 MIR4432-201ENST00000581823 84 ntBASIC-0.71□□□□□ -2.52
UPK1AO00322 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.72□□□□□ -2.52
UPK1AO00322 MIR181B2-201ENST00000385004 89 ntBASIC-0.72□□□□□ -2.52
UPK1AO00322 RNU6-578P-201ENST00000390980 103 ntBASIC-0.72□□□□□ -2.52
UPK1AO00322 AC022028.1-201ENST00000412054 408 ntBASIC-0.72□□□□□ -2.52
UPK1AO00322 MTND5P40-201ENST00000559945 246 ntBASIC-0.72□□□□□ -2.52
UPK1AO00322 MIR4282-201ENST00000583613 67 ntBASIC-0.72□□□□□ -2.52
UPK1AO00322 AP001362.1-201ENST00000625165 124 ntBASIC-0.72□□□□□ -2.52
UPK1AO00322 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 SNORD114-29-201ENST00000364819 70 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 RNU6-643P-201ENST00000384018 107 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 MIR206-201ENST00000384872 86 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 MIR519A1-201ENST00000385257 85 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 RNU4-69P-201ENST00000410677 143 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 SNORD63B-201ENST00000411005 70 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 AC069503.3-201ENST00000618674 145 ntBASIC-0.73□□□□□ -2.53
UPK1AO00322 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.74□□□□□ -2.53
UPK1AO00322 RNU6-170P-201ENST00000362832 104 ntBASIC-0.74□□□□□ -2.53
UPK1AO00322 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.74□□□□□ -2.53
UPK1AO00322 RNU6-524P-201ENST00000384270 107 ntBASIC-0.74□□□□□ -2.53
UPK1AO00322 SNORD77B-201ENST00000391112 67 ntBASIC-0.74□□□□□ -2.53
UPK1AO00322 AC074198.2-201ENST00000508153 258 ntBASIC-0.74□□□□□ -2.53
UPK1AO00322 RNU2-35P-201ENST00000516446 142 ntBASIC-0.74□□□□□ -2.53
UPK1AO00322 AL590491.3-201ENST00000610731 82 ntBASIC-0.74□□□□□ -2.53
UPK1AO00322 SNORD114-14-201ENST00000362723 75 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 RNU6-474P-201ENST00000384243 107 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 RNU6-713P-201ENST00000384761 107 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 MIR224-201ENST00000384889 81 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 RNA5SP66-201ENST00000517178 101 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 AC138907.4-201ENST00000570107 226 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 YWHAEP2-201ENST00000580066 112 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 AC021443.1-201ENST00000604478 211 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 AC011603.4-201ENST00000611325 277 ntBASIC-0.75□□□□□ -2.53
UPK1AO00322 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.76□□□□□ -2.53
UPK1AO00322 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.76□□□□□ -2.53
UPK1AO00322 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.76□□□□□ -2.53
UPK1AO00322 MIR548S-201ENST00000581352 82 ntBASIC-0.76□□□□□ -2.53
UPK1AO00322 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
UPK1AO00322 AL603914.1-201ENST00000401964 204 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 RNU7-164P-201ENST00000459221 62 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 RNU6-240P-201ENST00000516098 97 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 AP001328.1-201ENST00000528550 176 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 MIR4802-201ENST00000581881 80 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 RNU2-4P-201ENST00000606190 192 ntBASIC-0.77□□□□□ -2.53
UPK1AO00322 MIR335-201ENST00000362173 94 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 SNORD115-44-201ENST00000365391 82 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 RNU6-47P-201ENST00000383866 107 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 SNORA3B-201ENST00000391305 131 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 RNU4-63P-201ENST00000411313 118 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 MIR1270-201ENST00000459320 83 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 RNA5SP236-201ENST00000516169 116 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 MIR4460-201ENST00000577862 86 ntBASIC-0.78□□□□□ -2.53
UPK1AO00322 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.78□□□□□ -2.53
UPK1AO00322 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.79□□□□□ -2.54
UPK1AO00322 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.79□□□□□ -2.54
UPK1AO00322 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.79□□□□□ -2.54
UPK1AO00322 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.79□□□□□ -2.54
UPK1AO00322 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.79□□□□□ -2.54
UPK1AO00322 RNU6-571P-201ENST00000384128 107 ntBASIC-0.79□□□□□ -2.54
UPK1AO00322 RNU6-455P-201ENST00000384681 107 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms