Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RNU7-41P-201ENST00000515917 61 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-70P-201ENST00000516438 60 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-448P-201ENST00000517052 107 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AC138749.4-201ENST00000563970 127 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR4536-1-201ENST00000583537 88 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR664A-201ENST00000626086 82 ntBASIC1.8□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-811P-201ENST00000384069 107 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SNORA72.6-201ENST00000384520 129 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 Y_RNA.532-201ENST00000384590 113 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR518A2-201ENST00000384966 87 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SNRPGP12-201ENST00000449481 213 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 Y_RNA.648-201ENST00000459455 110 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AC005908.1-201ENST00000468701 347 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-871P-201ENST00000516122 100 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SNORA18.5-201ENST00000516616 101 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-557P-201ENST00000516842 110 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU1-17P-201ENST00000363022 152 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SNORA25.9-201ENST00000365087 128 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNU6-949P-201ENST00000384040 107 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 SNORA48.1-201ENST00000390879 135 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 HSPE1P24-201ENST00000450782 238 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 AC009474.2-201ENST00000451383 136 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 RNA5SP481-201ENST00000516814 122 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 MIR502-201ENST00000606349 86 ntBASIC1.78□□□□□ -2.12
C1QTNF3-AMACRE9PGA6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 Y_RNA.119-201ENST00000363301 96 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNA5SP190-201ENST00000365222 118 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-132P-201ENST00000383863 107 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR516A2-201ENST00000384888 90 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR588-201ENST00000384900 83 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR516A1-201ENST00000385033 90 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNA5SP458-201ENST00000516188 119 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNA5SP465-201ENST00000391195 109 ntBASIC1.76□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 AC244023.1-201ENST00000426884 112 ntBASIC1.76□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 FGF7P7-201ENST00000514120 227 ntBASIC1.76□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 Y_RNA.681-201ENST00000516445 113 ntBASIC1.76□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 AC242498.1-201ENST00000604134 111 ntBASIC1.76□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.76□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIRLET7F1-201ENST00000362202 87 ntBASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNA5SP276-201ENST00000362580 94 ntBASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-807P-201ENST00000516805 107 ntBASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 AL773524.1-201ENST00000614065 229 ntBASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 uc_338.20-201ENST00000621563 178 ntBASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-203P-201ENST00000384038 104 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-571P-201ENST00000384128 107 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-649P-201ENST00000384463 107 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SNORD77.2-201ENST00000391045 68 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-243P-201ENST00000391140 107 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SNORD90-201ENST00000391145 111 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNA5SP450-201ENST00000411206 102 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 AC015818.7-201ENST00000428754 109 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 snoU13.2-201ENST00000459201 104 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RN7SL274P-201ENST00000492268 272 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 Y_RNA.660-201ENST00000516002 120 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR3064-201ENST00000581130 66 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 AC104996.3-201ENST00000590718 94 ntBASIC1.74□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-208P-201ENST00000362431 107 ntBASIC1.73□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 Y_RNA.491-201ENST00000384417 107 ntBASIC1.73□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SNORD30.1-201ENST00000391309 70 ntBASIC1.73□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR1265-201ENST00000408444 86 ntBASIC1.73□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNA5SP489-201ENST00000410986 109 ntBASIC1.73□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-687P-201ENST00000516443 89 ntBASIC1.73□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.73□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SNORD36A-201ENST00000362874 73 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SNORA25.3-201ENST00000363205 127 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 Y_RNA.283-201ENST00000364798 112 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-205P-201ENST00000390858 107 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-75P-201ENST00000515944 104 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 RNU6-322P-201ENST00000516010 103 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SNORD111.1-201ENST00000516421 86 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 SNORA31.17-201ENST00000516953 127 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 AL096861.1-201ENST00000610899 123 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR6740-201ENST00000618268 113 ntBASIC1.72□□□□□ -2.13
C1QTNF3-AMACRE9PGA6 MIR548U-201ENST00000390728 81 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 232.7 ms