Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RNU1-143P-201ENST00000516296 146 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 SNORA64.4-201ENST00000516632 81 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 U1.23-201ENST00000610293 146 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 RNU1-68P-201ENST00000615382 146 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 U1.39-201ENST00000621562 146 ntBASIC2.47□□□□□ -2.01
RNF223E7ERA6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF223E7ERA6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF223E7ERA6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
RNF223E7ERA6 ZNF658B-202ENST00000615961 3375 ntBASIC2.46□□□□□ -2.02
RNF223E7ERA6 RNU6-936P-201ENST00000384005 107 ntBASIC2.46□□□□□ -2.02
RNF223E7ERA6 MIR1261-201ENST00000408659 82 ntBASIC2.46□□□□□ -2.02
RNF223E7ERA6 RNU7-24P-201ENST00000458867 62 ntBASIC2.46□□□□□ -2.02
RNF223E7ERA6 AC107016.2-201ENST00000547968 190 ntBASIC2.46□□□□□ -2.02
RNF223E7ERA6 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
RNF223E7ERA6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.46□□□□□ -2.02
RNF223E7ERA6 AC073869.9-201ENST00000641610 120 ntBASIC2.46□□□□□ -2.02
RNF223E7ERA6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RNF223E7ERA6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.46□□□□□ -2.02
RNF223E7ERA6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RNF223E7ERA6 MIR148B-201ENST00000362252 99 ntBASIC2.45□□□□□ -2.02
RNF223E7ERA6 RNA5SP117-201ENST00000365294 118 ntBASIC2.45□□□□□ -2.02
RNF223E7ERA6 AC079600.2-201ENST00000550076 130 ntBASIC2.45□□□□□ -2.02
RNF223E7ERA6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RNF223E7ERA6 RNA5SP432-201ENST00000362480 116 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 RNA5SP383-201ENST00000362934 120 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 SNORD115-44-201ENST00000365391 82 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 RNU6-1039P-201ENST00000383931 107 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 SNORD109B-201ENST00000458961 67 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 SNORD109A-201ENST00000459128 67 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 RPL23AP42-201ENST00000471152 471 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 AC073476.4-201ENST00000628409 72 ntBASIC2.44□□□□□ -2.02
RNF223E7ERA6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RNF223E7ERA6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RNF223E7ERA6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNF223E7ERA6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.43□□□□□ -2.02
RNF223E7ERA6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNF223E7ERA6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
RNF223E7ERA6 RNU6-1184P-201ENST00000384588 108 ntBASIC2.43□□□□□ -2.02
RNF223E7ERA6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RNF223E7ERA6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RNF223E7ERA6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RNF223E7ERA6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RNF223E7ERA6 SNORA9.2-201ENST00000365361 133 ntBASIC2.42□□□□□ -2.02
RNF223E7ERA6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.42□□□□□ -2.02
RNF223E7ERA6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
RNF223E7ERA6 snoU13.21-201ENST00000459368 105 ntBASIC2.42□□□□□ -2.02
RNF223E7ERA6 MIR6509-201ENST00000614603 85 ntBASIC2.42□□□□□ -2.02
RNF223E7ERA6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
RNF223E7ERA6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.42□□□□□ -2.02
RNF223E7ERA6 RNU6-495P-201ENST00000362995 107 ntBASIC2.41□□□□□ -2.02
RNF223E7ERA6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RNF223E7ERA6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RNF223E7ERA6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RNF223E7ERA6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RNF223E7ERA6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RNF223E7ERA6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.4□□□□□ -2.02
RNF223E7ERA6 SNORD113-4-201ENST00000364802 75 ntBASIC2.4□□□□□ -2.03
RNF223E7ERA6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.4□□□□□ -2.03
RNF223E7ERA6 RN7SL330P-201ENST00000469709 307 ntBASIC2.4□□□□□ -2.03
RNF223E7ERA6 RNA5SP380-201ENST00000517190 98 ntBASIC2.4□□□□□ -2.03
RNF223E7ERA6 AC245166.1-201ENST00000521012 253 ntBASIC2.4□□□□□ -2.03
RNF223E7ERA6 MIR4529-201ENST00000578110 78 ntBASIC2.4□□□□□ -2.03
RNF223E7ERA6 MIR3938-201ENST00000582157 103 ntBASIC2.4□□□□□ -2.03
RNF223E7ERA6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.4□□□□□ -2.03
RNF223E7ERA6 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.4□□□□□ -2.03
RNF223E7ERA6 RNA5SP245-201ENST00000364239 121 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 RNU6-645P-201ENST00000364649 106 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 RNU6-535P-201ENST00000384722 107 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 MIR125B2-201ENST00000385128 89 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 SNORD83.1-201ENST00000411362 77 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 AC244505.6-201ENST00000452829 130 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 AC008413.1-201ENST00000511864 177 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 RNU6-122P-201ENST00000516818 107 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 SNORA31.25-201ENST00000517242 134 ntBASIC2.39□□□□□ -2.03
RNF223E7ERA6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.39□□□□□ -2.03
RNF223E7ERA6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RNF223E7ERA6 SNORD56.5-201ENST00000364281 72 ntBASIC2.38□□□□□ -2.03
RNF223E7ERA6 MIR216B-201ENST00000390186 82 ntBASIC2.38□□□□□ -2.03
RNF223E7ERA6 RNA5SP299-201ENST00000391203 116 ntBASIC2.38□□□□□ -2.03
RNF223E7ERA6 RNA5SP274-201ENST00000410484 108 ntBASIC2.38□□□□□ -2.03
RNF223E7ERA6 RN7SL75P-201ENST00000461926 281 ntBASIC2.38□□□□□ -2.03
RNF223E7ERA6 RNA5SP217-201ENST00000515959 91 ntBASIC2.38□□□□□ -2.03
RNF223E7ERA6 AL645939.4-201ENST00000604495 135 ntBASIC2.38□□□□□ -2.03
RNF223E7ERA6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF223E7ERA6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.38□□□□□ -2.03
RNF223E7ERA6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF223E7ERA6 RNU6-859P-201ENST00000362728 107 ntBASIC2.37□□□□□ -2.03
RNF223E7ERA6 RNA5SP215-201ENST00000363440 122 ntBASIC2.37□□□□□ -2.03
RNF223E7ERA6 NAMPTP3-201ENST00000569273 224 ntBASIC2.37□□□□□ -2.03
RNF223E7ERA6 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
RNF223E7ERA6 RNU6-934P-201ENST00000365154 107 ntBASIC2.36□□□□□ -2.03
RNF223E7ERA6 MIR203A-201ENST00000384836 110 ntBASIC2.36□□□□□ -2.03
RNF223E7ERA6 AC008608.1-201ENST00000603910 127 ntBASIC2.36□□□□□ -2.03
RNF223E7ERA6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.36□□□□□ -2.03
RNF223E7ERA6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RNF223E7ERA6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF223E7ERA6 U8.2-201ENST00000363156 134 ntBASIC2.35□□□□□ -2.03
RNF223E7ERA6 RNU6-439P-201ENST00000384188 106 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms