Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 RNU6-860P-201ENST00000410860 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-785P-201ENST00000411324 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU7-164P-201ENST00000459221 62 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 AC025627.3-201ENST00000582078 182 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 U6.90-201ENST00000614007 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 U6.70-201ENST00000620287 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 MIR6841-201ENST00000637129 72 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 MIR26B-201ENST00000362251 77 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.127-201ENST00000363386 109 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.281-201ENST00000364774 94 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNA5SP193-201ENST00000410353 107 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-781P-201ENST00000516377 101 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-412P-201ENST00000516434 106 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 AC090897.1-201ENST00000580909 226 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.362-201ENST00000365518 110 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 RNU6-429P-201ENST00000384582 108 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 RNU6-1104P-201ENST00000384723 104 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 MIR577-201ENST00000385196 96 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 SNORD12-201ENST00000391002 90 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 MIR1197-201ENST00000408818 88 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 RNU4-69P-201ENST00000410677 143 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 AL606753.1-201ENST00000427435 87 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 AC002350.1-201ENST00000490759 375 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 RNU6-229P-201ENST00000516614 102 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 AC243829.6-201ENST00000612652 106 ntBASIC0.78□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.114-201ENST00000363265 113 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 RNY1P11-201ENST00000363759 113 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 RNU6-1081P-201ENST00000384537 107 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 AC092628.1-201ENST00000436250 252 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 SNORD33.1-201ENST00000516213 88 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 U6.109-201ENST00000636749 87 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 AC023934.1-201ENST00000574529 2389 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 MTND5P18-201ENST00000445624 1801 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 RNA5SP327-201ENST00000362494 101 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 Y_RNA.198-201ENST00000364013 98 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 SNORD114-24-201ENST00000365029 72 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 MIR4771-2-201ENST00000577758 74 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 MIR4771-1-201ENST00000582617 74 ntBASIC0.77□□□□□ -2.29
SMCHD1A6NHR9 RNU6-363P-201ENST00000362895 105 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 RNU4-67P-201ENST00000364569 141 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 RNA5SP205-201ENST00000364653 136 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 MIR193B-201ENST00000384907 83 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 RPL39P34-201ENST00000477141 156 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 AC105081.1-201ENST00000617727 106 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 RNU6-716P-201ENST00000365621 103 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 MIR573-201ENST00000384964 99 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
SMCHD1A6NHR9 MIR30D-201ENST00000362283 70 ntBASIC0.75□□□□□ -2.29
SMCHD1A6NHR9 SNORA22.1-201ENST00000362701 134 ntBASIC0.75□□□□□ -2.29
SMCHD1A6NHR9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.75□□□□□ -2.29
SMCHD1A6NHR9 SNORA31.14-201ENST00000516728 116 ntBASIC0.75□□□□□ -2.29
SMCHD1A6NHR9 MIR4679-2-201ENST00000578358 77 ntBASIC0.75□□□□□ -2.29
SMCHD1A6NHR9 AL442128.1-201ENST00000615151 90 ntBASIC0.75□□□□□ -2.29
SMCHD1A6NHR9 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 RNU6-1154P-201ENST00000391001 104 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 TMSB4XP3-201ENST00000445144 114 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 RNU7-107P-201ENST00000459121 61 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 RNU7-156P-201ENST00000517214 74 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 RNU6-1333P-201ENST00000516162 93 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 MIR4711-201ENST00000578274 70 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 MIR3163-201ENST00000581592 73 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 RNU6-94P-201ENST00000607728 107 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 AL162376.1-201ENST00000624117 175 ntBASIC0.74□□□□□ -2.29
SMCHD1A6NHR9 RNA5SP257-201ENST00000363023 116 ntBASIC0.73□□□□□ -2.29
SMCHD1A6NHR9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.73□□□□□ -2.29
SMCHD1A6NHR9 SNORD12C-201ENST00000386307 89 ntBASIC0.73□□□□□ -2.29
SMCHD1A6NHR9 Y_RNA.586-201ENST00000391146 98 ntBASIC0.73□□□□□ -2.29
SMCHD1A6NHR9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.73□□□□□ -2.29
SMCHD1A6NHR9 RNU5E-3P-201ENST00000515913 68 ntBASIC0.73□□□□□ -2.29
SMCHD1A6NHR9 AP003327.1-201ENST00000529684 127 ntBASIC0.73□□□□□ -2.29
SMCHD1A6NHR9 MIR1255B1-201ENST00000636325 63 ntBASIC0.73□□□□□ -2.29
SMCHD1A6NHR9 Y_RNA.353-201ENST00000365440 108 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 MIR4500-201ENST00000579472 76 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 MIR924-201ENST00000638017 53 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 RNY4P6-201ENST00000363667 96 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 RPL39P28-201ENST00000465655 155 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 RNA5SP330-201ENST00000517096 96 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 AC141846.1-201ENST00000568348 142 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 MIR376B-201ENST00000614515 100 ntBASIC0.72□□□□□ -2.29
SMCHD1A6NHR9 Y_RNA.35-201ENST00000362601 101 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 SNORD77B-201ENST00000391112 67 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 RNU7-2P-201ENST00000516096 62 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 MIR6755-201ENST00000619993 66 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 U8.15-201ENST00000390947 134 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 PDCD5P2-201ENST00000507570 312 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 MIR548AE2-201ENST00000583456 67 ntBASIC0.71□□□□□ -2.3
SMCHD1A6NHR9 SNORD113-1-201ENST00000365321 69 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms