Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 RNU6-240P-201ENST00000516098 97 ntBASIC-0.29□□□□□ -2.46
TRAV39A0A0B4J263 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.29□□□□□ -2.46
TRAV39A0A0B4J263 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.29□□□□□ -2.46
TRAV39A0A0B4J263 MIR4677-201ENST00000584153 80 ntBASIC-0.29□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-275P-201ENST00000364910 107 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 MIR106A-201ENST00000384870 81 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 MIR599-201ENST00000385069 95 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 MTND2P23-201ENST00000422990 651 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 TRAJ51-201ENST00000504127 63 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 RNA5SP236-201ENST00000516169 116 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 AC138907.4-201ENST00000570107 226 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 MIR3925-201ENST00000584674 77 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 AC021443.1-201ENST00000604478 211 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 RNU7-10P-201ENST00000607194 63 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 U6.106-201ENST00000636360 105 ntBASIC-0.3□□□□□ -2.46
TRAV39A0A0B4J263 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 SNORD114-12-201ENST00000365400 75 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 MIR214-201ENST00000385214 110 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 MIR548H3-201ENST00000408771 118 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 RNU2-60P-201ENST00000517290 128 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 MIR1295B-201ENST00000636144 60 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 AC073869.9-201ENST00000641610 120 ntBASIC-0.31□□□□□ -2.46
TRAV39A0A0B4J263 SNORD114-31-201ENST00000363219 75 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-768P-201ENST00000384683 107 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 SNORD41.1-201ENST00000391000 69 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 SNORD110-201ENST00000408189 75 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 AC006210.1-201ENST00000424882 111 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 BX276092.1-201ENST00000427368 251 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 SNORD127-201ENST00000458892 86 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 RNU7-164P-201ENST00000459221 62 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 MIR1270-201ENST00000459320 83 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 AC104692.1-201ENST00000472406 90 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 NAMPTP3-201ENST00000569273 224 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 MIR6514-201ENST00000622549 70 ntBASIC-0.32□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-161P-201ENST00000363051 106 ntBASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-818P-201ENST00000364837 108 ntBASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 RNU7-48P-201ENST00000458875 63 ntBASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 AL670379.3-201ENST00000605040 251 ntBASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 uc_338.28-201ENST00000612082 187 ntBASIC-0.33□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.34□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-449P-201ENST00000383914 107 ntBASIC-0.34□□□□□ -2.46
TRAV39A0A0B4J263 MIR206-201ENST00000384872 86 ntBASIC-0.34□□□□□ -2.46
TRAV39A0A0B4J263 MIR548F4-201ENST00000408515 105 ntBASIC-0.34□□□□□ -2.46
TRAV39A0A0B4J263 RNU4-69P-201ENST00000410677 143 ntBASIC-0.34□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.34□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.34□□□□□ -2.46
TRAV39A0A0B4J263 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 SNORA75.1-201ENST00000391130 148 ntBASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 RNA5SP484-201ENST00000458857 111 ntBASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 RNU7-123P-201ENST00000515911 60 ntBASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 RNU6-180P-201ENST00000516697 61 ntBASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 AC008737.2-201ENST00000599446 118 ntBASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 AC084368.1-201ENST00000620935 65 ntBASIC-0.35□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 HMGN2P22-201ENST00000427588 175 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 MTATP6P21-201ENST00000440681 189 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 AC097635.1-201ENST00000450678 155 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 SNORD4A-201ENST00000459174 72 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 AC009779.6-201ENST00000603972 165 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 AC011603.4-201ENST00000611325 277 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 MIR6759-201ENST00000638110 65 ntBASIC-0.36□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 RNA5SP98-201ENST00000363158 137 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 RNU6-509P-201ENST00000363519 107 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 MIR606-201ENST00000384851 96 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 SNORD77B-201ENST00000391112 67 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 MIR4645-201ENST00000583158 77 ntBASIC-0.37□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 RNU6-865P-201ENST00000364772 107 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 MIR516B1-201ENST00000385211 90 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 RNU7-195P-201ENST00000458793 62 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 AL117187.1-201ENST00000555482 181 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 AP001362.1-201ENST00000625165 124 ntBASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.38□□□□□ -2.47
TRAV39A0A0B4J263 RNU6-508P-201ENST00000363231 103 ntBASIC-0.39□□□□□ -2.47
TRAV39A0A0B4J263 SNORA18.1-201ENST00000363418 128 ntBASIC-0.39□□□□□ -2.47
TRAV39A0A0B4J263 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.39□□□□□ -2.47
TRAV39A0A0B4J263 RNU6-588P-201ENST00000410281 105 ntBASIC-0.39□□□□□ -2.47
TRAV39A0A0B4J263 SNORD63B-201ENST00000411005 70 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms