Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL161722.3-201ENST00000605789 2983 ntBASIC2.33□□□□□ -2.04
HRH3Q9Y5N1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HRH3Q9Y5N1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HRH3Q9Y5N1 RNU6-1229P-201ENST00000364295 107 ntBASIC2.32□□□□□ -2.04
HRH3Q9Y5N1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HRH3Q9Y5N1 MIR548U-201ENST00000390728 81 ntBASIC2.32□□□□□ -2.04
HRH3Q9Y5N1 MIR8074-201ENST00000615081 81 ntBASIC2.32□□□□□ -2.04
HRH3Q9Y5N1 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.32□□□□□ -2.04
HRH3Q9Y5N1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HRH3Q9Y5N1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HRH3Q9Y5N1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 RNU6-686P-201ENST00000364839 107 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 RNU6-439P-201ENST00000384188 106 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 MIR516A2-201ENST00000384888 90 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 MIR516A1-201ENST00000385033 90 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 SNORD93-201ENST00000408813 74 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 AC245517.4-201ENST00000448601 281 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 AC015688.6-201ENST00000577737 104 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 MIR6715A-201ENST00000615929 79 ntBASIC2.31□□□□□ -2.04
HRH3Q9Y5N1 AL596028.1-201ENST00000326971 197 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 MIR377-201ENST00000362145 69 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 MIR103A2-201ENST00000362154 78 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 RNU6-478P-201ENST00000363904 110 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 SNORA3.2-201ENST00000408221 125 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 AC090255.1-201ENST00000495779 349 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 FGF7P7-201ENST00000514120 227 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 RNU6-250P-201ENST00000516958 103 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 SNORD92-201ENST00000585078 85 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 AL359851.1-201ENST00000569460 4997 ntBASIC2.3□□□□□ -2.04
HRH3Q9Y5N1 SNORA63.2-201ENST00000362603 126 ntBASIC2.29□□□□□ -2.04
HRH3Q9Y5N1 SNORD36A-201ENST00000362874 73 ntBASIC2.29□□□□□ -2.04
HRH3Q9Y5N1 SNORD114-30-201ENST00000364448 72 ntBASIC2.29□□□□□ -2.04
HRH3Q9Y5N1 MIR18B-201ENST00000454574 71 ntBASIC2.29□□□□□ -2.04
HRH3Q9Y5N1 MIR4287-201ENST00000579398 78 ntBASIC2.29□□□□□ -2.04
HRH3Q9Y5N1 AC104984.5-201ENST00000586878 94 ntBASIC2.29□□□□□ -2.04
HRH3Q9Y5N1 AL773524.1-201ENST00000614065 229 ntBASIC2.29□□□□□ -2.04
HRH3Q9Y5N1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HRH3Q9Y5N1 SNORA70B-201ENST00000384210 135 ntBASIC2.28□□□□□ -2.04
HRH3Q9Y5N1 AC244636.1-201ENST00000421152 228 ntBASIC2.28□□□□□ -2.04
HRH3Q9Y5N1 RNA5SP24-201ENST00000516478 95 ntBASIC2.28□□□□□ -2.04
HRH3Q9Y5N1 RNU7-10P-201ENST00000607194 63 ntBASIC2.28□□□□□ -2.04
HRH3Q9Y5N1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
HRH3Q9Y5N1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
HRH3Q9Y5N1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 MIR101-2-201ENST00000362195 79 ntBASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 Y_RNA.283-201ENST00000364798 112 ntBASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 Z98742.3-201ENST00000418637 326 ntBASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 RNU6-531P-201ENST00000516694 104 ntBASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 MIR4491-201ENST00000581087 68 ntBASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 MIR8063-201ENST00000621930 81 ntBASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 MIR6516-201ENST00000630554 81 ntBASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.27□□□□□ -2.05
HRH3Q9Y5N1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 RNA5SP432-201ENST00000362480 116 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 RNA5SP264-201ENST00000363115 107 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 RNU6-403P-201ENST00000363163 104 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 Y_RNA.264-201ENST00000364665 102 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 SNORA18.5-201ENST00000516616 101 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 RNU6-807P-201ENST00000516805 107 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 SNORA77B-201ENST00000578179 125 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 MIR4713-201ENST00000582691 75 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 ZNF658B-202ENST00000615961 3375 ntBASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HRH3Q9Y5N1 MIRLET7A1-201ENST00000362295 80 ntBASIC2.25□□□□□ -2.05
HRH3Q9Y5N1 RNU6-161P-201ENST00000363051 106 ntBASIC2.25□□□□□ -2.05
HRH3Q9Y5N1 MIR635-201ENST00000384830 98 ntBASIC2.25□□□□□ -2.05
HRH3Q9Y5N1 AC104996.3-201ENST00000590718 94 ntBASIC2.25□□□□□ -2.05
HRH3Q9Y5N1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HRH3Q9Y5N1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HRH3Q9Y5N1 Y_RNA.491-201ENST00000384417 107 ntBASIC2.24□□□□□ -2.05
HRH3Q9Y5N1 RNU4-53P-201ENST00000410828 140 ntBASIC2.24□□□□□ -2.05
HRH3Q9Y5N1 SNORA25.16-201ENST00000516741 121 ntBASIC2.24□□□□□ -2.05
HRH3Q9Y5N1 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
HRH3Q9Y5N1 SNRPGP19-201ENST00000603826 189 ntBASIC2.24□□□□□ -2.05
HRH3Q9Y5N1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.24□□□□□ -2.05
HRH3Q9Y5N1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HRH3Q9Y5N1 SNORD33-201ENST00000362761 85 ntBASIC2.23□□□□□ -2.05
HRH3Q9Y5N1 SNORD63B-201ENST00000411005 70 ntBASIC2.23□□□□□ -2.05
HRH3Q9Y5N1 RNU6-1108P-201ENST00000516308 104 ntBASIC2.23□□□□□ -2.05
HRH3Q9Y5N1 MIR548H5-201ENST00000580314 60 ntBASIC2.23□□□□□ -2.05
HRH3Q9Y5N1 MIR5092-201ENST00000583139 88 ntBASIC2.23□□□□□ -2.05
HRH3Q9Y5N1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HRH3Q9Y5N1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HRH3Q9Y5N1 U8.2-201ENST00000363156 134 ntBASIC2.22□□□□□ -2.05
HRH3Q9Y5N1 RNA5SP456-201ENST00000364002 114 ntBASIC2.22□□□□□ -2.05
HRH3Q9Y5N1 RNU1-36P-201ENST00000365130 165 ntBASIC2.22□□□□□ -2.05
HRH3Q9Y5N1 RNA5SP292-201ENST00000390974 118 ntBASIC2.22□□□□□ -2.05
HRH3Q9Y5N1 SNORD77.2-201ENST00000391045 68 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms