Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU7-90P-201ENST00000459216 62 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 RNU7-79P-201ENST00000516082 62 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-412P-201ENST00000516434 106 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 AL662814.1-201ENST00000617364 121 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 MIR6740-201ENST00000618268 113 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.28□□□□□ -2.2
SSX2IPQ9Y2D8 RNU6-1325P-201ENST00000364905 105 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.362-201ENST00000365518 110 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-1165P-201ENST00000410119 107 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 RNA5SP95-201ENST00000410319 137 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 AC141846.1-201ENST00000568348 142 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 MIR6129-201ENST00000616087 109 ntBASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SSX2IPQ9Y2D8 AL589743.1-201ENST00000551932 2712 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.35-201ENST00000362601 101 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.36-201ENST00000362602 112 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 RNU1-93P-201ENST00000364704 169 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 MIR222-201ENST00000384992 110 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 MIR18B-201ENST00000454574 71 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 RPL39P34-201ENST00000477141 156 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 AC036111.3-201ENST00000526389 112 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 FAM71BP1-201ENST00000604431 523 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 AC012676.2-201ENST00000619258 186 ntBASIC1.26□□□□□ -2.21
SSX2IPQ9Y2D8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.281-201ENST00000364774 94 ntBASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.344-201ENST00000365381 112 ntBASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 SNORA25-201ENST00000384384 134 ntBASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-429P-201ENST00000384582 108 ntBASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 MIR520E-201ENST00000384867 87 ntBASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 MT-TF-201ENST00000387314 71 ntBASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 AC106800.4-201ENST00000614905 153 ntBASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.25□□□□□ -2.21
SSX2IPQ9Y2D8 RNY1P13-201ENST00000365030 105 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-215P-201ENST00000365169 102 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 SNORD20-201ENST00000384550 80 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 MIR598-201ENST00000384868 97 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 MIR1270-201ENST00000459320 83 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-589P-201ENST00000516485 107 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 AC008163.1-202ENST00000636004 2889 ntBASIC1.24□□□□□ -2.21
SSX2IPQ9Y2D8 MIR30D-201ENST00000362283 70 ntBASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.49-201ENST00000362714 112 ntBASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 SNORD114-10-201ENST00000363409 72 ntBASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.309-201ENST00000365046 111 ntBASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-949P-201ENST00000384040 107 ntBASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 RPL39P25-201ENST00000449384 154 ntBASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.709-201ENST00000516952 92 ntBASIC1.23□□□□□ -2.21
SSX2IPQ9Y2D8 SNORA63.5-201ENST00000363548 123 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 SNORD114-27-201ENST00000363766 70 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-616P-201ENST00000384353 107 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.507-201ENST00000384500 99 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.549-201ENST00000384657 102 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 MIR1912-201ENST00000410389 80 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-919P-201ENST00000516731 104 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 AC023827.1-201ENST00000569247 97 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 Y_RNA.773-201ENST00000607168 90 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 AL035470.1-201ENST00000622571 220 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 AL162726.3-218ENST00000636401 95 ntBASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SSX2IPQ9Y2D8 RNU6-363P-201ENST00000362895 105 ntBASIC1.21□□□□□ -2.22
SSX2IPQ9Y2D8 Y_RNA.85-201ENST00000363014 111 ntBASIC1.21□□□□□ -2.22
SSX2IPQ9Y2D8 AC063976.4-201ENST00000421971 163 ntBASIC1.21□□□□□ -2.22
SSX2IPQ9Y2D8 AC002429.1-201ENST00000437672 148 ntBASIC1.21□□□□□ -2.22
SSX2IPQ9Y2D8 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
SSX2IPQ9Y2D8 SNORD67.1-201ENST00000516618 108 ntBASIC1.21□□□□□ -2.22
SSX2IPQ9Y2D8 RNU7-137P-201ENST00000516788 62 ntBASIC1.21□□□□□ -2.22
SSX2IPQ9Y2D8 MIR151B-201ENST00000584249 96 ntBASIC1.21□□□□□ -2.22
SSX2IPQ9Y2D8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 SNORD115-35-201ENST00000365122 82 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-816P-201ENST00000390914 107 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-1268P-201ENST00000391214 107 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-1239P-201ENST00000391310 107 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-447P-201ENST00000410293 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-1118P-201ENST00000410382 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-1076P-201ENST00000410397 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-355P-201ENST00000410427 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-791P-201ENST00000410467 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-705P-201ENST00000410601 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-1100P-201ENST00000410691 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-860P-201ENST00000410860 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-1217P-201ENST00000411276 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 RNU6-785P-201ENST00000411324 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 uc_338.6-201ENST00000613544 171 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 U6.90-201ENST00000614007 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 MIR6788-201ENST00000618842 66 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 U6.70-201ENST00000620287 104 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
SSX2IPQ9Y2D8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms