Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MIR154-201ENST00000385243 84 ntBASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 SNORA26.6-201ENST00000391256 115 ntBASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 MIR3169-201ENST00000578032 83 ntBASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 MIR6734-201ENST00000621166 68 ntBASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL17A1Q9UMD9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.67□□□□□ -1.98
COL17A1Q9UMD9 AL078603.1-201ENST00000603824 313 ntBASIC2.67□□□□□ -1.98
COL17A1Q9UMD9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.67□□□□□ -1.98
COL17A1Q9UMD9 MIR1297-201ENST00000637311 77 ntBASIC2.67□□□□□ -1.98
COL17A1Q9UMD9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.66□□□□□ -1.98
COL17A1Q9UMD9 RNU6-342P-201ENST00000384521 104 ntBASIC2.66□□□□□ -1.98
COL17A1Q9UMD9 Y_RNA.660-201ENST00000516002 120 ntBASIC2.66□□□□□ -1.98
COL17A1Q9UMD9 RNU6-958P-201ENST00000516995 106 ntBASIC2.66□□□□□ -1.98
COL17A1Q9UMD9 AC105081.1-201ENST00000617727 106 ntBASIC2.66□□□□□ -1.98
COL17A1Q9UMD9 RNA5SP133-201ENST00000363368 119 ntBASIC2.65□□□□□ -1.98
COL17A1Q9UMD9 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.98
COL17A1Q9UMD9 MIR1267-201ENST00000408723 78 ntBASIC2.65□□□□□ -1.98
COL17A1Q9UMD9 FGF7P7-201ENST00000514120 227 ntBASIC2.65□□□□□ -1.98
COL17A1Q9UMD9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.65□□□□□ -1.98
COL17A1Q9UMD9 MIR6717-201ENST00000622747 73 ntBASIC2.65□□□□□ -1.98
COL17A1Q9UMD9 RNU6-1321P-201ENST00000390905 107 ntBASIC2.65□□□□□ -1.99
COL17A1Q9UMD9 RNU6-630P-201ENST00000391258 106 ntBASIC2.65□□□□□ -1.99
COL17A1Q9UMD9 AC079150.2-201ENST00000443733 78 ntBASIC2.65□□□□□ -1.99
COL17A1Q9UMD9 RNU7-85P-201ENST00000458851 63 ntBASIC2.65□□□□□ -1.99
COL17A1Q9UMD9 SNORD67.1-201ENST00000516618 108 ntBASIC2.65□□□□□ -1.99
COL17A1Q9UMD9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.65□□□□□ -1.99
COL17A1Q9UMD9 MIR4791-201ENST00000607666 84 ntBASIC2.65□□□□□ -1.99
COL17A1Q9UMD9 MIR6515-201ENST00000619843 57 ntBASIC2.65□□□□□ -1.99
COL17A1Q9UMD9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL17A1Q9UMD9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL17A1Q9UMD9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL17A1Q9UMD9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL17A1Q9UMD9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
COL17A1Q9UMD9 AC244636.1-201ENST00000421152 228 ntBASIC2.64□□□□□ -1.99
COL17A1Q9UMD9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.64□□□□□ -1.99
COL17A1Q9UMD9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 RNU6-163P-201ENST00000384396 106 ntBASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 MIR520H-201ENST00000385126 88 ntBASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 RNA5SP292-201ENST00000390974 118 ntBASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 AC074348.1-201ENST00000426503 132 ntBASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 RNU7-26P-201ENST00000458980 63 ntBASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 FO624990.1-201ENST00000636373 85 ntBASIC2.63□□□□□ -1.99
COL17A1Q9UMD9 RNU6-424P-201ENST00000384367 105 ntBASIC2.62□□□□□ -1.99
COL17A1Q9UMD9 SNORD38.2-201ENST00000384470 69 ntBASIC2.62□□□□□ -1.99
COL17A1Q9UMD9 SNORD77.2-201ENST00000391045 68 ntBASIC2.62□□□□□ -1.99
COL17A1Q9UMD9 STAG3L5P-204ENST00000443759 179 ntBASIC2.62□□□□□ -1.99
COL17A1Q9UMD9 AC009474.2-201ENST00000451383 136 ntBASIC2.62□□□□□ -1.99
COL17A1Q9UMD9 RNU7-67P-201ENST00000459003 62 ntBASIC2.62□□□□□ -1.99
COL17A1Q9UMD9 MIR502-201ENST00000606349 86 ntBASIC2.62□□□□□ -1.99
COL17A1Q9UMD9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL17A1Q9UMD9 RNU1-93P-201ENST00000364704 169 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 RNU6-205P-201ENST00000390858 107 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 AL034345.1-201ENST00000407768 123 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 AC092628.1-201ENST00000436250 252 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 AC245047.7-201ENST00000440265 293 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 RNA5SP137-201ENST00000516833 135 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 RNU6-303P-201ENST00000517091 106 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 RNU7-35P-201ENST00000517174 62 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 MIR4421-201ENST00000578133 69 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 MIR8054-201ENST00000620877 86 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 SNORD3E-202ENST00000627253 216 ntBASIC2.61□□□□□ -1.99
COL17A1Q9UMD9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL17A1Q9UMD9 SNORA7.1-201ENST00000363750 139 ntBASIC2.6□□□□□ -1.99
COL17A1Q9UMD9 RNU1-42P-201ENST00000364033 160 ntBASIC2.6□□□□□ -1.99
COL17A1Q9UMD9 RNA5SP109-201ENST00000391010 116 ntBASIC2.6□□□□□ -1.99
COL17A1Q9UMD9 RNU11-3P-201ENST00000391111 133 ntBASIC2.6□□□□□ -1.99
COL17A1Q9UMD9 SNORA18.5-201ENST00000516616 101 ntBASIC2.6□□□□□ -1.99
COL17A1Q9UMD9 AC027279.3-201ENST00000625055 122 ntBASIC2.6□□□□□ -1.99
COL17A1Q9UMD9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
COL17A1Q9UMD9 RNU6-330P-201ENST00000363015 107 ntBASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 SNORA8.1-201ENST00000384250 140 ntBASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 RNU6-913P-201ENST00000390913 95 ntBASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 RNA5SP261-201ENST00000410536 106 ntBASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 RNU6-1086P-201ENST00000410930 100 ntBASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 AC015922.2-201ENST00000435593 184 ntBASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 MIR8066-201ENST00000617280 78 ntBASIC2.59□□□□□ -1.99
COL17A1Q9UMD9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
COL17A1Q9UMD9 RNU6-208P-201ENST00000362431 107 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 Y_RNA.98-201ENST00000363109 102 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.58□□□□□ -2
COL17A1Q9UMD9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.58□□□□□ -2
COL17A1Q9UMD9 RNU7-48P-201ENST00000458875 63 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 RNU7-53P-201ENST00000516705 60 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 MIR5094-201ENST00000578766 85 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
COL17A1Q9UMD9 Y_RNA.264-201ENST00000364665 102 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 RNA5SP465-201ENST00000391195 109 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 RNU4-83P-201ENST00000410863 133 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 HMGN1P33-201ENST00000432945 451 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.58□□□□□ -2
COL17A1Q9UMD9 AC079804.2-201ENST00000490376 200 ntBASIC2.58□□□□□ -2
COL17A1Q9UMD9 RNU7-79P-201ENST00000516082 62 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms