Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 RNU6-1131P-201ENST00000364955 107 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 MIR488-201ENST00000365739 83 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 RNU6-997P-201ENST00000384725 107 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 RNA5SP95-201ENST00000410319 137 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 RNU6-1054P-201ENST00000411293 104 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 AC004941.2-201ENST00000427009 228 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 RPS29P28-201ENST00000446439 141 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 snoU13.26-201ENST00000459452 105 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 AC091304.10-201ENST00000641554 121 ntBASIC2.04□□□□□ -2.08
BRPF3Q9ULD4 MIR30D-201ENST00000362283 70 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 AC096949.1-201ENST00000412047 152 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 AC048334.1-201ENST00000477975 159 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 RNU6-1006P-201ENST00000516998 103 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 AC133485.1-201ENST00000567176 124 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 SNORA4-201ENST00000584302 138 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 MIR548Z-201ENST00000584743 97 ntBASIC2.03□□□□□ -2.08
BRPF3Q9ULD4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
BRPF3Q9ULD4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
BRPF3Q9ULD4 Y_RNA.95-201ENST00000363079 95 ntBASIC2.02□□□□□ -2.09
BRPF3Q9ULD4 SNORD38.1-201ENST00000363863 68 ntBASIC2.02□□□□□ -2.09
BRPF3Q9ULD4 uc_338.6-201ENST00000613544 171 ntBASIC2.02□□□□□ -2.09
BRPF3Q9ULD4 MIR4777-201ENST00000583710 86 ntBASIC2.01□□□□□ -2.09
BRPF3Q9ULD4 SEPT14P17-201ENST00000617978 177 ntBASIC2.01□□□□□ -2.09
BRPF3Q9ULD4 MALAT1.1-201ENST00000618249 95 ntBASIC2.01□□□□□ -2.09
BRPF3Q9ULD4 Y_RNA.140-201ENST00000363474 103 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 RNU6-60P-201ENST00000364792 103 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 RNU6-580P-201ENST00000365159 107 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 Y_RNA.342-201ENST00000365352 113 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 RNU6-49P-201ENST00000384256 107 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 RNU6-644P-201ENST00000391155 98 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 RNU7-61P-201ENST00000515897 61 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 SNORA31.2-201ENST00000516019 134 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 AP001362.1-201ENST00000625165 124 ntBASIC2□□□□□ -2.09
BRPF3Q9ULD4 Y_RNA.220-201ENST00000364244 109 ntBASIC1.99□□□□□ -2.09
BRPF3Q9ULD4 MT-TF-201ENST00000387314 71 ntBASIC1.99□□□□□ -2.09
BRPF3Q9ULD4 MIR4679-1-201ENST00000637619 75 ntBASIC1.99□□□□□ -2.09
BRPF3Q9ULD4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.98□□□□□ -2.09
BRPF3Q9ULD4 U8.15-201ENST00000390947 134 ntBASIC1.98□□□□□ -2.09
BRPF3Q9ULD4 SNORA26.9-201ENST00000391322 122 ntBASIC1.98□□□□□ -2.09
BRPF3Q9ULD4 AC109327.2-201ENST00000448339 378 ntBASIC1.98□□□□□ -2.09
BRPF3Q9ULD4 MIR4439-201ENST00000583746 80 ntBASIC1.98□□□□□ -2.09
BRPF3Q9ULD4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
BRPF3Q9ULD4 RNY1P2-201ENST00000364820 117 ntBASIC1.97□□□□□ -2.09
BRPF3Q9ULD4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.97□□□□□ -2.09
BRPF3Q9ULD4 Y_RNA.467-201ENST00000384297 102 ntBASIC1.97□□□□□ -2.09
BRPF3Q9ULD4 SNORD38.2-201ENST00000384470 69 ntBASIC1.97□□□□□ -2.09
BRPF3Q9ULD4 SNORA2B-201ENST00000384583 137 ntBASIC1.97□□□□□ -2.09
BRPF3Q9ULD4 MRPL35P3-201ENST00000421557 364 ntBASIC1.97□□□□□ -2.09
BRPF3Q9ULD4 Y_RNA.96-201ENST00000363092 109 ntBASIC1.96□□□□□ -2.1
BRPF3Q9ULD4 RNY1P7-201ENST00000384743 110 ntBASIC1.96□□□□□ -2.1
BRPF3Q9ULD4 MIR504-201ENST00000385065 83 ntBASIC1.96□□□□□ -2.1
BRPF3Q9ULD4 SNORA75.2-201ENST00000391138 150 ntBASIC1.96□□□□□ -2.1
BRPF3Q9ULD4 SNORA75.3-201ENST00000391231 150 ntBASIC1.96□□□□□ -2.1
BRPF3Q9ULD4 RNU6-294P-201ENST00000364999 102 ntBASIC1.95□□□□□ -2.1
BRPF3Q9ULD4 SNORD26-201ENST00000384147 75 ntBASIC1.95□□□□□ -2.1
BRPF3Q9ULD4 MIR548G-201ENST00000408442 89 ntBASIC1.95□□□□□ -2.1
BRPF3Q9ULD4 MIR18B-201ENST00000454574 71 ntBASIC1.95□□□□□ -2.1
BRPF3Q9ULD4 AC138749.4-201ENST00000563970 127 ntBASIC1.95□□□□□ -2.1
BRPF3Q9ULD4 RNU6-90P-201ENST00000606352 106 ntBASIC1.95□□□□□ -2.1
BRPF3Q9ULD4 RNU6-1163P-201ENST00000364516 107 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 MIR764-201ENST00000390811 85 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 SPINT5P-201ENST00000448174 155 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 Y_RNA.705-201ENST00000516862 110 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 U7.3-201ENST00000616123 62 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 AC012676.2-201ENST00000619258 186 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 U6.109-201ENST00000636749 87 ntBASIC1.94□□□□□ -2.1
BRPF3Q9ULD4 Y_RNA.290-201ENST00000364879 114 ntBASIC1.93□□□□□ -2.1
BRPF3Q9ULD4 MIR320A-201ENST00000385302 82 ntBASIC1.93□□□□□ -2.1
BRPF3Q9ULD4 RNU6-162P-201ENST00000516228 103 ntBASIC1.93□□□□□ -2.1
BRPF3Q9ULD4 MTND5P40-201ENST00000559945 246 ntBASIC1.93□□□□□ -2.1
BRPF3Q9ULD4 RNU6-86P-201ENST00000606534 107 ntBASIC1.93□□□□□ -2.1
BRPF3Q9ULD4 SNORD113.3-201ENST00000364630 78 ntBASIC1.92□□□□□ -2.1
BRPF3Q9ULD4 RNU6-813P-201ENST00000384691 107 ntBASIC1.92□□□□□ -2.1
BRPF3Q9ULD4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
BRPF3Q9ULD4 RNU6-844P-201ENST00000517175 102 ntBASIC1.92□□□□□ -2.1
BRPF3Q9ULD4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.92□□□□□ -2.1
BRPF3Q9ULD4 AC036111.3-201ENST00000526389 112 ntBASIC1.92□□□□□ -2.1
BRPF3Q9ULD4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.92□□□□□ -2.1
BRPF3Q9ULD4 RNA5SP133-201ENST00000363368 119 ntBASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 RNU6-972P-201ENST00000391208 107 ntBASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 RNU6-887P-201ENST00000410660 100 ntBASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 AL591704.2-201ENST00000421658 181 ntBASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 RNU1-98P-201ENST00000458992 160 ntBASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 snoU13.21-201ENST00000459368 105 ntBASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 AC090897.1-201ENST00000580909 226 ntBASIC1.91□□□□□ -2.1
BRPF3Q9ULD4 RNU6-910P-201ENST00000390844 107 ntBASIC1.9□□□□□ -2.11
BRPF3Q9ULD4 SNORD93-201ENST00000408813 74 ntBASIC1.9□□□□□ -2.11
BRPF3Q9ULD4 BTF3P4-201ENST00000418852 495 ntBASIC1.9□□□□□ -2.11
BRPF3Q9ULD4 SNORA25.15-201ENST00000516487 89 ntBASIC1.9□□□□□ -2.11
BRPF3Q9ULD4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
BRPF3Q9ULD4 HSBP1P2-201ENST00000299671 229 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 274.1 ms