Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 MIR624-201ENST00000385217 97 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 MT-TD-201ENST00000387419 68 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 MIR548L-201ENST00000408303 86 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 AC141846.1-201ENST00000568348 142 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 MIR4801-201ENST00000582704 82 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 SNORA70.25-201ENST00000612741 95 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 MIR371B-201ENST00000638082 66 ntBASIC-0.11□□□□□ -2.43
CCDC88CQ9P219 RNU6-508P-201ENST00000363231 103 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 RNU6-309P-201ENST00000364573 106 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 RNU6-867P-201ENST00000364956 107 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 MIR616-201ENST00000385293 97 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 RNU6-765P-201ENST00000516916 99 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 RNU7-70P-201ENST00000516941 66 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 MIR4680-201ENST00000580906 66 ntBASIC-0.12□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 MIR206-201ENST00000384872 86 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 MIR548P-201ENST00000408336 84 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 RNA5SP163-201ENST00000410304 99 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 RNU6-893P-201ENST00000458841 100 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 RNU2-35P-201ENST00000516446 142 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 NAMPTP3-201ENST00000569273 224 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 MIR548S-201ENST00000581352 82 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 MIR5197-201ENST00000583721 112 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 AC096720.1-201ENST00000604441 183 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 SNORD14C-201ENST00000365382 88 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 RNU7-129P-201ENST00000516128 62 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 SCARNA15-202ENST00000516881 127 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 SNORA40.15-201ENST00000516884 107 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 AC011921.3-201ENST00000605540 361 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 uc_338.10-201ENST00000621872 182 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 MIR376A2-201ENST00000636782 80 ntBASIC-0.13□□□□□ -2.43
CCDC88CQ9P219 MIR101-1-201ENST00000362265 75 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 RNA5SP128-201ENST00000365305 116 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 SNORA33.2-201ENST00000365413 134 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 MIR617-201ENST00000385030 97 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 RNU6-493P-201ENST00000391321 108 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 PCNPP3-201ENST00000393579 471 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 SNORD110-201ENST00000408189 75 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 AC021613.1-201ENST00000623880 111 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 RNA5SP98-201ENST00000363158 137 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 RNU6-865P-201ENST00000364772 107 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 RNY1P6-201ENST00000384193 109 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 SNORA72.6-201ENST00000384520 129 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 RNU4-83P-201ENST00000410863 133 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 MIR4282-201ENST00000583613 67 ntBASIC-0.14□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 RNU6-238P-201ENST00000363313 106 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 RNU6-103P-201ENST00000363686 107 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 RNY1P2-201ENST00000364820 117 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 AC113618.1-201ENST00000416747 285 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 AC020661.2-201ENST00000560114 134 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 AC138907.4-201ENST00000570107 226 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 RNU2-4P-201ENST00000606190 192 ntBASIC-0.15□□□□□ -2.43
CCDC88CQ9P219 SNORD115-2-201ENST00000362842 82 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 RNU6-161P-201ENST00000363051 106 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 SNORD115-20-201ENST00000365099 82 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 SNORD41.1-201ENST00000391000 69 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 SNORA75.1-201ENST00000391130 148 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 CR383656.4-201ENST00000546909 122 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 AC021753.1-201ENST00000635724 168 ntBASIC-0.16□□□□□ -2.43
CCDC88CQ9P219 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.16□□□□□ -2.44
CCDC88CQ9P219 RNU6-652P-201ENST00000365488 107 ntBASIC-0.16□□□□□ -2.44
CCDC88CQ9P219 RNU6-768P-201ENST00000384683 107 ntBASIC-0.16□□□□□ -2.44
CCDC88CQ9P219 RNU6-127P-201ENST00000390897 107 ntBASIC-0.16□□□□□ -2.44
CCDC88CQ9P219 RNU7-53P-201ENST00000516705 60 ntBASIC-0.16□□□□□ -2.44
CCDC88CQ9P219 SNORA25.1-201ENST00000362326 128 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms