Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RNU6-887P-201ENST00000410660 100 ntBASIC2.08□□□□□ -2.08
TMEM39AQ9NV64 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
TMEM39AQ9NV64 AC245517.4-201ENST00000448601 281 ntBASIC2.08□□□□□ -2.08
TMEM39AQ9NV64 snoU13.25-201ENST00000458945 104 ntBASIC2.08□□□□□ -2.08
TMEM39AQ9NV64 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
TMEM39AQ9NV64 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 RNU6-813P-201ENST00000384691 107 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 MIR450A2-201ENST00000385022 100 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 AL133373.1-201ENST00000497098 94 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 RNU6-86P-201ENST00000606534 107 ntBASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.07□□□□□ -2.08
TMEM39AQ9NV64 MIR302D-201ENST00000362275 68 ntBASIC2.06□□□□□ -2.08
TMEM39AQ9NV64 MIR30A-201ENST00000385092 71 ntBASIC2.06□□□□□ -2.08
TMEM39AQ9NV64 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
TMEM39AQ9NV64 SNORA44.1-201ENST00000517031 108 ntBASIC2.06□□□□□ -2.08
TMEM39AQ9NV64 AC019176.1-201ENST00000518519 225 ntBASIC2.06□□□□□ -2.08
TMEM39AQ9NV64 AP000753.3-201ENST00000604083 169 ntBASIC2.06□□□□□ -2.08
TMEM39AQ9NV64 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TMEM39AQ9NV64 Y_RNA.190-201ENST00000363964 101 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 RNU6-1163P-201ENST00000364516 107 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 SNORD1A-201ENST00000364968 72 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 RNU6-949P-201ENST00000384040 107 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 MIR9-3-201ENST00000385084 90 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 AC079140.2-201ENST00000506193 142 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 MIR2115-201ENST00000516657 100 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 AC133485.1-201ENST00000567176 124 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 MIR4264-201ENST00000583520 66 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
TMEM39AQ9NV64 Y_RNA.17-201ENST00000362433 111 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 RNU6-820P-201ENST00000384273 107 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 RNU6-205P-201ENST00000390858 107 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 SNORA67.5-201ENST00000391036 107 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 MIR548G-201ENST00000408442 89 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 SPINT5P-201ENST00000448174 155 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 RN7SKP12-201ENST00000516275 143 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 RNU6-90P-201ENST00000606352 106 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 MIR6740-201ENST00000618268 113 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 AP001362.1-201ENST00000625165 124 ntBASIC2.04□□□□□ -2.08
TMEM39AQ9NV64 MIR494-201ENST00000349529 81 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 SNORD38.2-201ENST00000384470 69 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 U8.15-201ENST00000390947 134 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 Y_RNA.593-201ENST00000410292 98 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 MIR4303-201ENST00000581299 66 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 SEPT14P17-201ENST00000617978 177 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 MIR6516-201ENST00000630554 81 ntBASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TMEM39AQ9NV64 SNORD33-201ENST00000362761 85 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 RNA5SP138-201ENST00000365098 114 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 Y_RNA.567-201ENST00000384736 106 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 MIR563-201ENST00000385080 79 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 MIR518E-201ENST00000385252 88 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 MIR1185-1-201ENST00000408598 86 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 AP003716.2-201ENST00000528260 108 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 MTND5P40-201ENST00000559945 246 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 MIR3937-201ENST00000580135 106 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 AC103810.7-201ENST00000607821 91 ntBASIC2.02□□□□□ -2.09
TMEM39AQ9NV64 MIR103A2-201ENST00000362154 78 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 RNA5SP264-201ENST00000363115 107 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 SNORD58A-201ENST00000383875 65 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 RNU6-1065P-201ENST00000384513 106 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 MT-TN-201ENST00000387400 73 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 RNU7-62P-201ENST00000458856 62 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 RPS29P11-201ENST00000496507 171 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 RNU11-2P-201ENST00000516898 142 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 AL096840.1-201ENST00000603287 93 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 BX248123.2-201ENST00000606318 124 ntBASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TMEM39AQ9NV64 RNA5SP173-201ENST00000364857 136 ntBASIC2□□□□□ -2.09
TMEM39AQ9NV64 RNU6-1165P-201ENST00000410119 107 ntBASIC2□□□□□ -2.09
TMEM39AQ9NV64 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2□□□□□ -2.09
TMEM39AQ9NV64 SNORA4-201ENST00000584302 138 ntBASIC2□□□□□ -2.09
TMEM39AQ9NV64 MIR502-201ENST00000606349 86 ntBASIC2□□□□□ -2.09
TMEM39AQ9NV64 AC012676.2-201ENST00000619258 186 ntBASIC2□□□□□ -2.09
TMEM39AQ9NV64 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
TMEM39AQ9NV64 RNU6-1244P-201ENST00000363614 108 ntBASIC1.99□□□□□ -2.09
TMEM39AQ9NV64 SNORD116-10-201ENST00000363791 102 ntBASIC1.99□□□□□ -2.09
TMEM39AQ9NV64 RNY1P2-201ENST00000364820 117 ntBASIC1.99□□□□□ -2.09
TMEM39AQ9NV64 MIR489-201ENST00000384923 84 ntBASIC1.99□□□□□ -2.09
TMEM39AQ9NV64 RPL30P7-201ENST00000479312 323 ntBASIC1.99□□□□□ -2.09
TMEM39AQ9NV64 MIR3664-201ENST00000579074 99 ntBASIC1.99□□□□□ -2.09
TMEM39AQ9NV64 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
TMEM39AQ9NV64 MIR30D-201ENST00000362283 70 ntBASIC1.98□□□□□ -2.09
TMEM39AQ9NV64 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
TMEM39AQ9NV64 RNU1-98P-201ENST00000458992 160 ntBASIC1.98□□□□□ -2.09
TMEM39AQ9NV64 AL512598.1-201ENST00000610158 273 ntBASIC1.98□□□□□ -2.09
TMEM39AQ9NV64 IGLL4P-201ENST00000614590 133 ntBASIC1.98□□□□□ -2.09
TMEM39AQ9NV64 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms