Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.69□□□□□ -2.3
NLRC4Q9NPP4 Y_RNA.651-201ENST00000459380 103 ntBASIC0.69□□□□□ -2.3
NLRC4Q9NPP4 RNU6-765P-201ENST00000516916 99 ntBASIC0.69□□□□□ -2.3
NLRC4Q9NPP4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.69□□□□□ -2.3
NLRC4Q9NPP4 AP003327.1-201ENST00000529684 127 ntBASIC0.69□□□□□ -2.3
NLRC4Q9NPP4 Y_RNA.8-201ENST00000362353 102 ntBASIC0.68□□□□□ -2.3
NLRC4Q9NPP4 RNU6-508P-201ENST00000363231 103 ntBASIC0.68□□□□□ -2.3
NLRC4Q9NPP4 RNA5SP220-201ENST00000516298 104 ntBASIC0.68□□□□□ -2.3
NLRC4Q9NPP4 MIR548AE2-201ENST00000583456 67 ntBASIC0.68□□□□□ -2.3
NLRC4Q9NPP4 Y_RNA.150-201ENST00000363562 102 ntBASIC0.67□□□□□ -2.3
NLRC4Q9NPP4 Y_RNA.299-201ENST00000364973 94 ntBASIC0.67□□□□□ -2.3
NLRC4Q9NPP4 RNU6-886P-201ENST00000384319 105 ntBASIC0.67□□□□□ -2.3
NLRC4Q9NPP4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
NLRC4Q9NPP4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.67□□□□□ -2.3
NLRC4Q9NPP4 AC096949.1-201ENST00000412047 152 ntBASIC0.67□□□□□ -2.3
NLRC4Q9NPP4 RNU7-123P-201ENST00000515911 60 ntBASIC0.67□□□□□ -2.3
NLRC4Q9NPP4 Y_RNA.366-201ENST00000365540 102 ntBASIC0.66□□□□□ -2.3
NLRC4Q9NPP4 RNU6-804P-201ENST00000384286 107 ntBASIC0.66□□□□□ -2.3
NLRC4Q9NPP4 RNU6-679P-201ENST00000391003 106 ntBASIC0.66□□□□□ -2.3
NLRC4Q9NPP4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.66□□□□□ -2.3
NLRC4Q9NPP4 MIR3144-201ENST00000579460 79 ntBASIC0.66□□□□□ -2.3
NLRC4Q9NPP4 MIR6734-201ENST00000621166 68 ntBASIC0.66□□□□□ -2.3
NLRC4Q9NPP4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 RNU7-197P-201ENST00000458836 62 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 RNU6-469P-201ENST00000516253 101 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.692-201ENST00000516627 105 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 DEFB131E-201ENST00000532329 154 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 AC098479.1-201ENST00000609225 154 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 AL137067.1-201ENST00000615933 120 ntBASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
NLRC4Q9NPP4 RNU6-460P-201ENST00000391158 108 ntBASIC0.64□□□□□ -2.31
NLRC4Q9NPP4 SNORA25.12-201ENST00000516202 82 ntBASIC0.64□□□□□ -2.31
NLRC4Q9NPP4 MIR5000-201ENST00000577717 103 ntBASIC0.64□□□□□ -2.31
NLRC4Q9NPP4 MIR3678-201ENST00000578455 94 ntBASIC0.64□□□□□ -2.31
NLRC4Q9NPP4 MIR548X2-201ENST00000579776 100 ntBASIC0.64□□□□□ -2.31
NLRC4Q9NPP4 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
NLRC4Q9NPP4 AC092634.7-201ENST00000621022 103 ntBASIC0.64□□□□□ -2.31
NLRC4Q9NPP4 RNU6-915P-201ENST00000364943 103 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 RNU6-42P-201ENST00000384165 107 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 MIR518E-201ENST00000385252 88 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 PCNPP3-201ENST00000393579 471 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 RNU4-69P-201ENST00000410677 143 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 SNORD67.1-201ENST00000516618 108 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 SNORA25.16-201ENST00000516741 121 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 uc_338.16-201ENST00000621804 95 ntBASIC0.63□□□□□ -2.31
NLRC4Q9NPP4 SNORD114-10-201ENST00000363409 72 ntBASIC0.62□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.398-201ENST00000383952 99 ntBASIC0.62□□□□□ -2.31
NLRC4Q9NPP4 RNU7-137P-201ENST00000516788 62 ntBASIC0.62□□□□□ -2.31
NLRC4Q9NPP4 RNU4-58P-201ENST00000363192 141 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 RNA5SP133-201ENST00000363368 119 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.400-201ENST00000383963 111 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 SNORD77B-201ENST00000391112 67 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 AC108059.2-201ENST00000434626 151 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 AP001328.1-201ENST00000528550 176 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 MIR3671-201ENST00000580455 88 ntBASIC0.61□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.555-201ENST00000384673 110 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 RNY4P20-201ENST00000516678 93 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 MIR3121-201ENST00000579680 77 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 AC108081.1-201ENST00000604358 221 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 U6.109-201ENST00000636749 87 ntBASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
NLRC4Q9NPP4 RNU6-535P-201ENST00000384722 107 ntBASIC0.59□□□□□ -2.31
NLRC4Q9NPP4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.59□□□□□ -2.31
NLRC4Q9NPP4 RNU6-531P-201ENST00000516694 104 ntBASIC0.59□□□□□ -2.31
NLRC4Q9NPP4 Y_RNA.215-201ENST00000364204 112 ntBASIC0.58□□□□□ -2.32
NLRC4Q9NPP4 MIR644A-201ENST00000385262 94 ntBASIC0.58□□□□□ -2.32
NLRC4Q9NPP4 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
NLRC4Q9NPP4 MTND5P34-201ENST00000568888 325 ntBASIC0.58□□□□□ -2.32
NLRC4Q9NPP4 AL359881.1-201ENST00000602916 267 ntBASIC0.58□□□□□ -2.32
NLRC4Q9NPP4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.58□□□□□ -2.32
NLRC4Q9NPP4 AC105081.1-201ENST00000617727 106 ntBASIC0.58□□□□□ -2.32
NLRC4Q9NPP4 AP001340.1-201ENST00000624405 217 ntBASIC0.58□□□□□ -2.32
NLRC4Q9NPP4 Y_RNA.420-201ENST00000384043 110 ntBASIC0.57□□□□□ -2.32
NLRC4Q9NPP4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.57□□□□□ -2.32
NLRC4Q9NPP4 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
NLRC4Q9NPP4 SNORA31.14-201ENST00000516728 116 ntBASIC0.57□□□□□ -2.32
NLRC4Q9NPP4 RNU6-135P-201ENST00000516769 101 ntBASIC0.57□□□□□ -2.32
NLRC4Q9NPP4 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
NLRC4Q9NPP4 MIR101-2-201ENST00000362195 79 ntBASIC0.56□□□□□ -2.32
NLRC4Q9NPP4 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
NLRC4Q9NPP4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.56□□□□□ -2.32
NLRC4Q9NPP4 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
NLRC4Q9NPP4 RNA5SP517-201ENST00000364724 117 ntBASIC0.56□□□□□ -2.32
NLRC4Q9NPP4 RNU6-291P-201ENST00000384720 107 ntBASIC0.56□□□□□ -2.32
NLRC4Q9NPP4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
NLRC4Q9NPP4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.56□□□□□ -2.32
NLRC4Q9NPP4 AC022523.2-201ENST00000561045 150 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms