Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RNU6-1086P-201ENST00000410930 100 ntBASIC1.02□□□□□ -2.25
HIPK3Q9H422 SNORD83.1-201ENST00000411362 77 ntBASIC1.02□□□□□ -2.25
HIPK3Q9H422 RNU7-107P-201ENST00000459121 61 ntBASIC1.02□□□□□ -2.25
HIPK3Q9H422 UBL5P1-201ENST00000507979 193 ntBASIC1.02□□□□□ -2.25
HIPK3Q9H422 RNU7-35P-201ENST00000517174 62 ntBASIC1.02□□□□□ -2.25
HIPK3Q9H422 AC141846.1-201ENST00000568348 142 ntBASIC1.02□□□□□ -2.25
HIPK3Q9H422 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
HIPK3Q9H422 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
HIPK3Q9H422 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.01□□□□□ -2.25
HIPK3Q9H422 RNU4-69P-201ENST00000410677 143 ntBASIC1.01□□□□□ -2.25
HIPK3Q9H422 RNU6-772P-201ENST00000516042 105 ntBASIC1.01□□□□□ -2.25
HIPK3Q9H422 RNU7-79P-201ENST00000516082 62 ntBASIC1.01□□□□□ -2.25
HIPK3Q9H422 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 RNY1P13-201ENST00000365030 105 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 SNORA32-201ENST00000384072 121 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 Y_RNA.528-201ENST00000384575 108 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 MIR942-201ENST00000401111 86 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 RPS26P5-201ENST00000418544 335 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 FABP5P4-201ENST00000437203 171 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 AC025166.1-201ENST00000612411 163 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 AC132825.6-201ENST00000638861 357 ntBASIC1□□□□□ -2.25
HIPK3Q9H422 RNU6-369P-201ENST00000362515 102 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 Y_RNA.198-201ENST00000364013 98 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 Y_RNA.525-201ENST00000384570 113 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 MT-TI-201ENST00000387365 69 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 Y_RNA.630-201ENST00000411370 108 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 AC067940.1-201ENST00000458411 300 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 MIR1270-201ENST00000459320 83 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 COX6CP6-201ENST00000490840 228 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 RNU6-659P-201ENST00000516454 104 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 MIR4771-2-201ENST00000577758 74 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 MIR4771-1-201ENST00000582617 74 ntBASIC0.99□□□□□ -2.25
HIPK3Q9H422 MIR1-1-201ENST00000362147 71 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 SNORD116-14-201ENST00000383894 92 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 SNORD116-17-201ENST00000383929 92 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 RNU6-949P-201ENST00000384040 107 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 SNORD116-15-201ENST00000384445 92 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 SNORD116-19-201ENST00000384729 92 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 MIR1827-201ENST00000408549 66 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 RNU4-61P-201ENST00000411243 107 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 AC015818.7-201ENST00000428754 109 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 AC087499.7-201ENST00000441958 109 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
HIPK3Q9H422 MIR4714-201ENST00000580728 77 ntBASIC0.98□□□□□ -2.25
HIPK3Q9H422 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 MTND5P18-201ENST00000445624 1801 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 AL157777.2-201ENST00000258070 137 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 Y_RNA.213-201ENST00000364178 111 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 MIR759-201ENST00000390224 91 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 RNU7-185P-201ENST00000459215 60 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 U7.7-201ENST00000459276 60 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 Y_RNA.712-201ENST00000517011 92 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 AC020891.4-201ENST00000605745 93 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 AC023934.1-201ENST00000574529 2389 ntBASIC0.97□□□□□ -2.25
HIPK3Q9H422 Y_RNA.127-201ENST00000363386 109 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 Y_RNA.346-201ENST00000365385 112 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 MIR100-201ENST00000385259 80 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 U8.15-201ENST00000390947 134 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 SNORD89-201ENST00000390981 114 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 RPL39P25-201ENST00000449384 154 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 RNU6-1110P-201ENST00000516462 101 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 MIR3163-201ENST00000581592 73 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 MIR3914-2-201ENST00000637339 95 ntBASIC0.96□□□□□ -2.26
HIPK3Q9H422 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 Y_RNA.374-201ENST00000365606 101 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 MIR1257-201ENST00000408490 117 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 AC004941.2-201ENST00000427009 228 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 RNU6-1333P-201ENST00000516162 93 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 RNU7-6P-201ENST00000516845 62 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 RNU6-789P-201ENST00000517105 102 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 MIR4676-201ENST00000583078 72 ntBASIC0.95□□□□□ -2.26
HIPK3Q9H422 MIR125B2-201ENST00000385128 89 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 SNORD77B-201ENST00000391112 67 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 SNORD93-201ENST00000408813 74 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 RNU6-735P-201ENST00000410612 107 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 AC096949.1-201ENST00000412047 152 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.94□□□□□ -2.26
HIPK3Q9H422 PDCD5P2-201ENST00000507570 312 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 RNU6-977P-201ENST00000516411 103 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 SNORD67.1-201ENST00000516618 108 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 RNU7-137P-201ENST00000516788 62 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 AL359881.1-201ENST00000602916 267 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 FAM71BP1-201ENST00000604431 523 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 AC087741.2-201ENST00000619415 172 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 AL589743.1-201ENST00000551932 2712 ntBASIC0.94□□□□□ -2.26
HIPK3Q9H422 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
HIPK3Q9H422 SNORD113-1-201ENST00000365321 69 ntBASIC0.93□□□□□ -2.26
HIPK3Q9H422 RNU6-1117P-201ENST00000384525 104 ntBASIC0.93□□□□□ -2.26
HIPK3Q9H422 AC008267.6-201ENST00000441664 139 ntBASIC0.93□□□□□ -2.26
HIPK3Q9H422 RNU6-406P-201ENST00000516470 107 ntBASIC0.93□□□□□ -2.26
HIPK3Q9H422 MIR4804-201ENST00000581683 73 ntBASIC0.93□□□□□ -2.26
HIPK3Q9H422 AL365222.1-201ENST00000614661 98 ntBASIC0.93□□□□□ -2.26
HIPK3Q9H422 SNORD114-10-201ENST00000363409 72 ntBASIC0.92□□□□□ -2.26
HIPK3Q9H422 Y_RNA.261-201ENST00000364631 102 ntBASIC0.92□□□□□ -2.26
HIPK3Q9H422 MIR193B-201ENST00000384907 83 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms