Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 Y_RNA.107-201ENST00000363190 121 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 SNORA25.3-201ENST00000363205 127 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 RNA5SP48-201ENST00000363969 126 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 SNORD115-35-201ENST00000365122 82 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 Y_RNA.342-201ENST00000365352 113 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS16Q9H269 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 UBL5P1-201ENST00000507979 193 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 RNU6-1018P-201ENST00000516577 106 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 SNORD67.1-201ENST00000516618 108 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 AL512598.1-201ENST00000610158 273 ntBASIC1.4□□□□□ -2.19
VPS16Q9H269 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
VPS16Q9H269 Y_RNA.247-201ENST00000364500 92 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 Y_RNA.354-201ENST00000365448 111 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 Y_RNA.377-201ENST00000365644 108 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 SNORD38B-201ENST00000384690 67 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 AC108667.1-201ENST00000428618 249 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 RNU7-79P-201ENST00000516082 62 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 RNU7-2P-201ENST00000516096 62 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 RNU6-1006P-201ENST00000516998 103 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS16Q9H269 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS16Q9H269 MALAT1.1-201ENST00000618249 95 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 SNORD38B-202ENST00000625943 69 ntBASIC1.39□□□□□ -2.19
VPS16Q9H269 RNU6-170P-201ENST00000362832 104 ntBASIC1.38□□□□□ -2.19
VPS16Q9H269 RNU6-294P-201ENST00000364999 102 ntBASIC1.38□□□□□ -2.19
VPS16Q9H269 RNU6-1237P-201ENST00000384777 107 ntBASIC1.38□□□□□ -2.19
VPS16Q9H269 RNU6-1086P-201ENST00000410930 100 ntBASIC1.38□□□□□ -2.19
VPS16Q9H269 RNU7-137P-201ENST00000516788 62 ntBASIC1.38□□□□□ -2.19
VPS16Q9H269 AP003716.2-201ENST00000528260 108 ntBASIC1.38□□□□□ -2.19
VPS16Q9H269 MIR4777-201ENST00000583710 86 ntBASIC1.38□□□□□ -2.19
VPS16Q9H269 AL442128.1-201ENST00000615151 90 ntBASIC1.38□□□□□ -2.19
VPS16Q9H269 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
VPS16Q9H269 RNA5SP432-201ENST00000362480 116 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 RNY1P13-201ENST00000365030 105 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 RNU6-1321P-201ENST00000390905 107 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 RNU6-644P-201ENST00000391155 98 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 AC096949.1-201ENST00000412047 152 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 AC004941.2-201ENST00000427009 228 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 AC108729.3-201ENST00000513484 108 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 RNU7-61P-201ENST00000515897 61 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 SNORA31.2-201ENST00000516019 134 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 AC105081.1-201ENST00000617727 106 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 MIR2052-201ENST00000636055 55 ntBASIC1.37□□□□□ -2.19
VPS16Q9H269 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 Y_RNA.10-201ENST00000362371 110 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 SNORD73B-201ENST00000364394 72 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 Y_RNA.290-201ENST00000364879 114 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 Y_RNA.448-201ENST00000384185 108 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 MIR34C-201ENST00000384831 77 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 MIR1185-1-201ENST00000408598 86 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 AC048334.1-201ENST00000477975 159 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 RNU6-762P-201ENST00000517107 102 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 RNU6-844P-201ENST00000517175 102 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 AC141846.1-201ENST00000568348 142 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 AL662814.1-201ENST00000617364 121 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 AL512310.12-203ENST00000640543 90 ntBASIC1.36□□□□□ -2.19
VPS16Q9H269 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VPS16Q9H269 Y_RNA.467-201ENST00000384297 102 ntBASIC1.35□□□□□ -2.19
VPS16Q9H269 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
VPS16Q9H269 snoU13.2-201ENST00000459201 104 ntBASIC1.35□□□□□ -2.19
VPS16Q9H269 MIR4421-201ENST00000578133 69 ntBASIC1.35□□□□□ -2.19
VPS16Q9H269 MIR376B-201ENST00000614515 100 ntBASIC1.35□□□□□ -2.19
VPS16Q9H269 MIR6740-201ENST00000618268 113 ntBASIC1.35□□□□□ -2.19
VPS16Q9H269 Y_RNA.95-201ENST00000363079 95 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 SNORD114-10-201ENST00000363409 72 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 Y_RNA.220-201ENST00000364244 109 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 MIR563-201ENST00000385080 79 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 Y_RNA.659-201ENST00000515994 113 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 SNORA70.22-201ENST00000517160 124 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS16Q9H269 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 uc_338.6-201ENST00000613544 171 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 SEPT14P17-201ENST00000617978 177 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 MIR6516-201ENST00000630554 81 ntBASIC1.34□□□□□ -2.19
VPS16Q9H269 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
VPS16Q9H269 RNA5SP264-201ENST00000363115 107 ntBASIC1.33□□□□□ -2.2
VPS16Q9H269 SNORD45B-201ENST00000364617 72 ntBASIC1.33□□□□□ -2.2
VPS16Q9H269 MIR588-201ENST00000384900 83 ntBASIC1.33□□□□□ -2.2
VPS16Q9H269 BTF3P4-201ENST00000418852 495 ntBASIC1.33□□□□□ -2.2
VPS16Q9H269 RNU6-162P-201ENST00000516228 103 ntBASIC1.33□□□□□ -2.2
VPS16Q9H269 SNORA72.7-201ENST00000516349 94 ntBASIC1.33□□□□□ -2.2
VPS16Q9H269 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS16Q9H269 U7.3-201ENST00000616123 62 ntBASIC1.33□□□□□ -2.2
VPS16Q9H269 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.33□□□□□ -2.2
VPS16Q9H269 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
VPS16Q9H269 RNU6-654P-201ENST00000364373 107 ntBASIC1.32□□□□□ -2.2
VPS16Q9H269 RNU6-396P-201ENST00000365369 105 ntBASIC1.32□□□□□ -2.2
VPS16Q9H269 RNU6-949P-201ENST00000384040 107 ntBASIC1.32□□□□□ -2.2
VPS16Q9H269 RNU6-910P-201ENST00000390844 107 ntBASIC1.32□□□□□ -2.2
VPS16Q9H269 RNU6-205P-201ENST00000390858 107 ntBASIC1.32□□□□□ -2.2
VPS16Q9H269 RNA5SP237-201ENST00000410414 113 ntBASIC1.32□□□□□ -2.2
VPS16Q9H269 AC109327.2-201ENST00000448339 378 ntBASIC1.32□□□□□ -2.2
VPS16Q9H269 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS16Q9H269 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 447.7 ms