Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MIR30A-201ENST00000385092 71 ntBASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 AC005908.1-201ENST00000468701 347 ntBASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 AC079140.2-201ENST00000506193 142 ntBASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 RNU11-2P-201ENST00000516898 142 ntBASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 AC138749.4-201ENST00000563970 127 ntBASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 MIR4648-201ENST00000580107 72 ntBASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 MIR3937-201ENST00000580135 106 ntBASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 MIR6516-201ENST00000630554 81 ntBASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
BHLHE41Q9C0J9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
BHLHE41Q9C0J9 Y_RNA.4-201ENST00000362333 112 ntBASIC2.05□□□□□ -2.08
BHLHE41Q9C0J9 AL356320.1-201ENST00000429616 163 ntBASIC2.05□□□□□ -2.08
BHLHE41Q9C0J9 HMGN2P23-201ENST00000456759 269 ntBASIC2.05□□□□□ -2.08
BHLHE41Q9C0J9 snoU13.25-201ENST00000458945 104 ntBASIC2.05□□□□□ -2.08
BHLHE41Q9C0J9 MIR4769-201ENST00000584126 77 ntBASIC2.05□□□□□ -2.08
BHLHE41Q9C0J9 AC103810.8-201ENST00000607347 118 ntBASIC2.05□□□□□ -2.08
BHLHE41Q9C0J9 AC025521.1-201ENST00000621624 286 ntBASIC2.05□□□□□ -2.08
BHLHE41Q9C0J9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 MIR30D-201ENST00000362283 70 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 SNORD33-201ENST00000362761 85 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 RNA5SP264-201ENST00000363115 107 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 RNA5SP133-201ENST00000363368 119 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 RNU6-509P-201ENST00000363519 107 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 MT-TF-201ENST00000387314 71 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 RPL30P7-201ENST00000479312 323 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.04□□□□□ -2.08
BHLHE41Q9C0J9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
BHLHE41Q9C0J9 MIR1185-1-201ENST00000408598 86 ntBASIC2.03□□□□□ -2.08
BHLHE41Q9C0J9 RNA5SP225-201ENST00000410874 135 ntBASIC2.03□□□□□ -2.08
BHLHE41Q9C0J9 AL161932.1-201ENST00000437408 146 ntBASIC2.03□□□□□ -2.08
BHLHE41Q9C0J9 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
BHLHE41Q9C0J9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.03□□□□□ -2.08
BHLHE41Q9C0J9 MIR8066-201ENST00000617280 78 ntBASIC2.03□□□□□ -2.08
BHLHE41Q9C0J9 MIR377-201ENST00000362145 69 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 RNU6-633P-201ENST00000362612 103 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 Y_RNA.57-201ENST00000362806 113 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 Y_RNA.119-201ENST00000363301 96 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 SNORD1A-201ENST00000364968 72 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 Y_RNA.437-201ENST00000384113 113 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 MIR1255A-201ENST00000408338 113 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 RNU6-613P-201ENST00000410412 108 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 RN7SKP223-201ENST00000410582 62 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 RNU7-171P-201ENST00000459581 62 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 AC020891.4-201ENST00000605745 93 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 MIR548BB-201ENST00000626714 66 ntBASIC2.02□□□□□ -2.09
BHLHE41Q9C0J9 AL359851.1-201ENST00000569460 4997 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 MIR302D-201ENST00000362275 68 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 RNU6-654P-201ENST00000364373 107 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 RNA5SP95-201ENST00000410319 137 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 RNU6-519P-201ENST00000410590 108 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 AC245517.4-201ENST00000448601 281 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 SNRPGP12-201ENST00000449481 213 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 AP003716.2-201ENST00000528260 108 ntBASIC2.01□□□□□ -2.09
BHLHE41Q9C0J9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
BHLHE41Q9C0J9 RNU6-53P-201ENST00000365367 106 ntBASIC2□□□□□ -2.09
BHLHE41Q9C0J9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
BHLHE41Q9C0J9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2□□□□□ -2.09
BHLHE41Q9C0J9 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
BHLHE41Q9C0J9 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
BHLHE41Q9C0J9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2□□□□□ -2.09
BHLHE41Q9C0J9 snoU13.23-201ENST00000458863 104 ntBASIC2□□□□□ -2.09
BHLHE41Q9C0J9 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
BHLHE41Q9C0J9 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
BHLHE41Q9C0J9 RNU6-850P-201ENST00000516934 103 ntBASIC2□□□□□ -2.09
BHLHE41Q9C0J9 MIR1273D-201ENST00000577266 86 ntBASIC2□□□□□ -2.09
BHLHE41Q9C0J9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
BHLHE41Q9C0J9 RNU6-571P-201ENST00000384128 107 ntBASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 BX276092.1-201ENST00000427368 251 ntBASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 AL627230.6-201ENST00000611129 280 ntBASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 uc_338.6-201ENST00000613544 171 ntBASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 AC006160.2-201ENST00000637708 154 ntBASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
BHLHE41Q9C0J9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
BHLHE41Q9C0J9 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
BHLHE41Q9C0J9 SNORD93-201ENST00000408813 74 ntBASIC1.98□□□□□ -2.09
BHLHE41Q9C0J9 MIR4666B-201ENST00000578142 81 ntBASIC1.98□□□□□ -2.09
BHLHE41Q9C0J9 MIR6873-201ENST00000622788 63 ntBASIC1.98□□□□□ -2.09
BHLHE41Q9C0J9 SNORA72.6-201ENST00000384520 129 ntBASIC1.97□□□□□ -2.09
BHLHE41Q9C0J9 RNU4-83P-201ENST00000410863 133 ntBASIC1.97□□□□□ -2.09
BHLHE41Q9C0J9 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
BHLHE41Q9C0J9 RPL23AP42-201ENST00000471152 471 ntBASIC1.97□□□□□ -2.09
BHLHE41Q9C0J9 MIR3664-201ENST00000579074 99 ntBASIC1.97□□□□□ -2.09
BHLHE41Q9C0J9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.97□□□□□ -2.09
BHLHE41Q9C0J9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 SNORD115-37-201ENST00000363768 82 ntBASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 MIR519C-201ENST00000385053 87 ntBASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 MIR18B-201ENST00000454574 71 ntBASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 AC015712.3-201ENST00000559380 164 ntBASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 MIR3198-2-201ENST00000577868 80 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms