Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AL591806.2-201ENST00000433122 173 ntBASIC2.14□□□□□ -2.07
ZKSCAN3Q9BRR0 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
ZKSCAN3Q9BRR0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.14□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR3202-2-201ENST00000635980 79 ntBASIC2.14□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR504-201ENST00000385065 83 ntBASIC2.13□□□□□ -2.07
ZKSCAN3Q9BRR0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.13□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-947P-201ENST00000516264 106 ntBASIC2.13□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-638P-201ENST00000516582 104 ntBASIC2.13□□□□□ -2.07
ZKSCAN3Q9BRR0 SNORA4-201ENST00000584302 138 ntBASIC2.13□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-1125P-201ENST00000363601 107 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-497P-201ENST00000365316 104 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-1276P-201ENST00000365372 104 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-480P-201ENST00000384332 107 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU1-98P-201ENST00000458992 160 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 RN7SL274P-201ENST00000492268 272 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 AL133373.1-201ENST00000497098 94 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-267P-201ENST00000516714 103 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU11-2P-201ENST00000516898 142 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR5588-201ENST00000581890 63 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR8063-201ENST00000621930 81 ntBASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ZKSCAN3Q9BRR0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
ZKSCAN3Q9BRR0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
ZKSCAN3Q9BRR0 Y_RNA.168-201ENST00000363740 102 ntBASIC2.11□□□□□ -2.07
ZKSCAN3Q9BRR0 RNY1P4-201ENST00000384595 115 ntBASIC2.11□□□□□ -2.07
ZKSCAN3Q9BRR0 snoU13.9-201ENST00000458927 103 ntBASIC2.11□□□□□ -2.07
ZKSCAN3Q9BRR0 AC104984.5-201ENST00000586878 94 ntBASIC2.11□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR6740-201ENST00000618268 113 ntBASIC2.11□□□□□ -2.07
ZKSCAN3Q9BRR0 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-979P-201ENST00000383896 107 ntBASIC2.1□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-1165P-201ENST00000410119 107 ntBASIC2.1□□□□□ -2.07
ZKSCAN3Q9BRR0 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
ZKSCAN3Q9BRR0 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
ZKSCAN3Q9BRR0 SNORA44.1-201ENST00000517031 108 ntBASIC2.1□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR4419B-201ENST00000577260 68 ntBASIC2.1□□□□□ -2.07
ZKSCAN3Q9BRR0 AC103810.8-201ENST00000607347 118 ntBASIC2.1□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR377-201ENST00000362145 69 ntBASIC2.09□□□□□ -2.07
ZKSCAN3Q9BRR0 SNORD33-201ENST00000362761 85 ntBASIC2.09□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU6-1124P-201ENST00000384169 107 ntBASIC2.09□□□□□ -2.07
ZKSCAN3Q9BRR0 Y_RNA.609-201ENST00000410669 89 ntBASIC2.09□□□□□ -2.07
ZKSCAN3Q9BRR0 RNU7-62P-201ENST00000458856 62 ntBASIC2.09□□□□□ -2.07
ZKSCAN3Q9BRR0 snoU13.25-201ENST00000458945 104 ntBASIC2.09□□□□□ -2.07
ZKSCAN3Q9BRR0 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
ZKSCAN3Q9BRR0 AP003716.2-201ENST00000528260 108 ntBASIC2.09□□□□□ -2.07
ZKSCAN3Q9BRR0 MIR302D-201ENST00000362275 68 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR30D-201ENST00000362283 70 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 SNORA2B-201ENST00000384583 137 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR30A-201ENST00000385092 71 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 MT-TF-201ENST00000387314 71 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 RNU6-205P-201ENST00000390858 107 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 AC138749.4-201ENST00000563970 127 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 AL513043.2-201ENST00000573941 143 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 AC090897.1-201ENST00000580909 226 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR6516-201ENST00000630554 81 ntBASIC2.08□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR103A2-201ENST00000362154 78 ntBASIC2.07□□□□□ -2.08
ZKSCAN3Q9BRR0 RNU6-228P-201ENST00000362700 106 ntBASIC2.07□□□□□ -2.08
ZKSCAN3Q9BRR0 Y_RNA.426-201ENST00000384068 113 ntBASIC2.07□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR181B2-201ENST00000385004 89 ntBASIC2.07□□□□□ -2.08
ZKSCAN3Q9BRR0 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
ZKSCAN3Q9BRR0 RNU7-171P-201ENST00000459581 62 ntBASIC2.07□□□□□ -2.08
ZKSCAN3Q9BRR0 RPL30P7-201ENST00000479312 323 ntBASIC2.07□□□□□ -2.08
ZKSCAN3Q9BRR0 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
ZKSCAN3Q9BRR0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 RNA5SP264-201ENST00000363115 107 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 RNU6-1065P-201ENST00000384513 106 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR1185-1-201ENST00000408598 86 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 RNU6-613P-201ENST00000410412 108 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 AL161932.1-201ENST00000437408 146 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 HMGN2P23-201ENST00000456759 269 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 AC079140.2-201ENST00000506193 142 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 U6.109-201ENST00000636749 87 ntBASIC2.06□□□□□ -2.08
ZKSCAN3Q9BRR0 RNU6-633P-201ENST00000362612 103 ntBASIC2.05□□□□□ -2.08
ZKSCAN3Q9BRR0 RNU6-509P-201ENST00000363519 107 ntBASIC2.05□□□□□ -2.08
ZKSCAN3Q9BRR0 SNORD1A-201ENST00000364968 72 ntBASIC2.05□□□□□ -2.08
ZKSCAN3Q9BRR0 AC005908.1-201ENST00000468701 347 ntBASIC2.05□□□□□ -2.08
ZKSCAN3Q9BRR0 AC015712.3-201ENST00000559380 164 ntBASIC2.05□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR4500-201ENST00000579472 76 ntBASIC2.05□□□□□ -2.08
ZKSCAN3Q9BRR0 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
ZKSCAN3Q9BRR0 AC025521.1-201ENST00000621624 286 ntBASIC2.05□□□□□ -2.08
ZKSCAN3Q9BRR0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 RNA5SP133-201ENST00000363368 119 ntBASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 Y_RNA.611-201ENST00000410682 108 ntBASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 SNRPGP12-201ENST00000449481 213 ntBASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 RNU6-548P-201ENST00000517083 115 ntBASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 AC019176.1-201ENST00000518519 225 ntBASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 MIR3124-201ENST00000582636 67 ntBASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 AC008163.1-202ENST00000636004 2889 ntBASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.04□□□□□ -2.08
ZKSCAN3Q9BRR0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms