Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SNORA40.8-201ENST00000411034 126 ntBASIC0.4□□□□□ -2.35
NDNQ99608 RNU6-469P-201ENST00000516253 101 ntBASIC0.4□□□□□ -2.35
NDNQ99608 SNORA81.3-201ENST00000517283 198 ntBASIC0.4□□□□□ -2.35
NDNQ99608 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.4□□□□□ -2.35
NDNQ99608 AC133485.4-201ENST00000561835 220 ntBASIC0.4□□□□□ -2.35
NDNQ99608 AC138907.4-201ENST00000570107 226 ntBASIC0.4□□□□□ -2.35
NDNQ99608 RNU6-682P-201ENST00000363843 106 ntBASIC0.39□□□□□ -2.35
NDNQ99608 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
NDNQ99608 AL603914.1-201ENST00000401964 204 ntBASIC0.39□□□□□ -2.35
NDNQ99608 AL512326.2-201ENST00000426359 151 ntBASIC0.39□□□□□ -2.35
NDNQ99608 RNU6-240P-201ENST00000516098 97 ntBASIC0.39□□□□□ -2.35
NDNQ99608 SNORA25.12-201ENST00000516202 82 ntBASIC0.39□□□□□ -2.35
NDNQ99608 RNU6-1194P-201ENST00000516208 104 ntBASIC0.39□□□□□ -2.35
NDNQ99608 RNU6-135P-201ENST00000516769 101 ntBASIC0.39□□□□□ -2.35
NDNQ99608 RNU2-60P-201ENST00000517290 128 ntBASIC0.39□□□□□ -2.35
NDNQ99608 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
NDNQ99608 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.39□□□□□ -2.35
NDNQ99608 Y_RNA.272-201ENST00000364696 102 ntBASIC0.38□□□□□ -2.35
NDNQ99608 RNA5SP517-201ENST00000364724 117 ntBASIC0.38□□□□□ -2.35
NDNQ99608 Y_RNA.299-201ENST00000364973 94 ntBASIC0.38□□□□□ -2.35
NDNQ99608 SNORA72.6-201ENST00000384520 129 ntBASIC0.38□□□□□ -2.35
NDNQ99608 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
NDNQ99608 Y_RNA.617-201ENST00000410920 90 ntBASIC0.38□□□□□ -2.35
NDNQ99608 RNU2-35P-201ENST00000516446 142 ntBASIC0.38□□□□□ -2.35
NDNQ99608 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.38□□□□□ -2.35
NDNQ99608 AC021443.1-201ENST00000604478 211 ntBASIC0.38□□□□□ -2.35
NDNQ99608 AC004792.1-201ENST00000614523 137 ntBASIC0.38□□□□□ -2.35
NDNQ99608 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.38□□□□□ -2.35
NDNQ99608 MIR3658-201ENST00000636291 56 ntBASIC0.38□□□□□ -2.35
NDNQ99608 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
NDNQ99608 Y_RNA.251-201ENST00000364551 99 ntBASIC0.37□□□□□ -2.35
NDNQ99608 Y_RNA.536-201ENST00000384621 113 ntBASIC0.37□□□□□ -2.35
NDNQ99608 SNORD71-201ENST00000411292 86 ntBASIC0.37□□□□□ -2.35
NDNQ99608 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
NDNQ99608 SNORD114-10-201ENST00000363409 72 ntBASIC0.36□□□□□ -2.35
NDNQ99608 MIR518A1-201ENST00000385068 85 ntBASIC0.36□□□□□ -2.35
NDNQ99608 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
NDNQ99608 RNU7-164P-201ENST00000459221 62 ntBASIC0.36□□□□□ -2.35
NDNQ99608 Y_RNA.690-201ENST00000516603 95 ntBASIC0.36□□□□□ -2.35
NDNQ99608 SNORA25.16-201ENST00000516741 121 ntBASIC0.36□□□□□ -2.35
NDNQ99608 Y_RNA.697-201ENST00000516776 113 ntBASIC0.36□□□□□ -2.35
NDNQ99608 AC112693.2-201ENST00000556538 232 ntBASIC0.36□□□□□ -2.35
NDNQ99608 MIR548AE2-201ENST00000583456 67 ntBASIC0.36□□□□□ -2.35
NDNQ99608 AC243829.3-201ENST00000622177 108 ntBASIC0.36□□□□□ -2.35
NDNQ99608 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
NDNQ99608 RNU4-58P-201ENST00000363192 141 ntBASIC0.35□□□□□ -2.35
NDNQ99608 SNORA32-201ENST00000384072 121 ntBASIC0.35□□□□□ -2.35
NDNQ99608 Y_RNA.567-201ENST00000384736 106 ntBASIC0.35□□□□□ -2.35
NDNQ99608 MIR216A-201ENST00000385063 110 ntBASIC0.35□□□□□ -2.35
NDNQ99608 RNA5SP193-201ENST00000410353 107 ntBASIC0.35□□□□□ -2.35
NDNQ99608 Y_RNA.651-201ENST00000459380 103 ntBASIC0.35□□□□□ -2.35
NDNQ99608 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
NDNQ99608 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
NDNQ99608 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
NDNQ99608 RNU6-309P-201ENST00000364573 106 ntBASIC0.34□□□□□ -2.36
NDNQ99608 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
NDNQ99608 RNU6-291P-201ENST00000384720 107 ntBASIC0.34□□□□□ -2.36
NDNQ99608 RNU6-535P-201ENST00000384722 107 ntBASIC0.34□□□□□ -2.36
NDNQ99608 MIR644A-201ENST00000385262 94 ntBASIC0.34□□□□□ -2.36
NDNQ99608 RNU4-69P-201ENST00000410677 143 ntBASIC0.34□□□□□ -2.36
NDNQ99608 SNORA31.14-201ENST00000516728 116 ntBASIC0.34□□□□□ -2.36
NDNQ99608 RNU7-137P-201ENST00000516788 62 ntBASIC0.34□□□□□ -2.36
NDNQ99608 RNU6-182P-201ENST00000516970 105 ntBASIC0.34□□□□□ -2.36
NDNQ99608 DEFB131E-201ENST00000532329 154 ntBASIC0.34□□□□□ -2.36
NDNQ99608 MIR6734-201ENST00000621166 68 ntBASIC0.34□□□□□ -2.36
NDNQ99608 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
NDNQ99608 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
NDNQ99608 Y_RNA.32-201ENST00000362589 110 ntBASIC0.33□□□□□ -2.36
NDNQ99608 RNA5SP133-201ENST00000363368 119 ntBASIC0.33□□□□□ -2.36
NDNQ99608 Y_RNA.298-201ENST00000364960 107 ntBASIC0.33□□□□□ -2.36
NDNQ99608 SNORA8.2-201ENST00000384372 139 ntBASIC0.33□□□□□ -2.36
NDNQ99608 Y_RNA.580-201ENST00000391004 95 ntBASIC0.33□□□□□ -2.36
NDNQ99608 snoU13.18-201ENST00000459483 104 ntBASIC0.33□□□□□ -2.36
NDNQ99608 RNU6-863P-201ENST00000515989 104 ntBASIC0.33□□□□□ -2.36
NDNQ99608 SNORD67.1-201ENST00000516618 108 ntBASIC0.33□□□□□ -2.36
NDNQ99608 AC022523.2-201ENST00000561045 150 ntBASIC0.33□□□□□ -2.36
NDNQ99608 AC098479.1-201ENST00000609225 154 ntBASIC0.33□□□□□ -2.36
NDNQ99608 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.33□□□□□ -2.36
NDNQ99608 SNORD44.1-201ENST00000363202 61 ntBASIC0.32□□□□□ -2.36
NDNQ99608 RNY1P11-201ENST00000363759 113 ntBASIC0.32□□□□□ -2.36
NDNQ99608 MIRLET7F2-201ENST00000385277 83 ntBASIC0.32□□□□□ -2.36
NDNQ99608 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
NDNQ99608 RNU7-123P-201ENST00000515911 60 ntBASIC0.32□□□□□ -2.36
NDNQ99608 RNA5SP436-201ENST00000516020 115 ntBASIC0.32□□□□□ -2.36
NDNQ99608 RNU6-531P-201ENST00000516694 104 ntBASIC0.32□□□□□ -2.36
NDNQ99608 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.32□□□□□ -2.36
NDNQ99608 MTND5P34-201ENST00000568888 325 ntBASIC0.32□□□□□ -2.36
NDNQ99608 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.32□□□□□ -2.36
NDNQ99608 Y_RNA.778-201ENST00000620203 90 ntBASIC0.32□□□□□ -2.36
NDNQ99608 RNU6-1099P-201ENST00000363533 107 ntBASIC0.31□□□□□ -2.36
NDNQ99608 RNU4-11P-201ENST00000365287 132 ntBASIC0.31□□□□□ -2.36
NDNQ99608 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
NDNQ99608 RNU6-449P-201ENST00000383914 107 ntBASIC0.31□□□□□ -2.36
NDNQ99608 Y_RNA.686-201ENST00000516548 134 ntBASIC0.31□□□□□ -2.36
NDNQ99608 AL137067.1-201ENST00000615933 120 ntBASIC0.31□□□□□ -2.36
NDNQ99608 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.31□□□□□ -2.36
NDNQ99608 SNORA36.1-201ENST00000363424 132 ntBASIC0.3□□□□□ -2.36
NDNQ99608 RNU6-151P-201ENST00000364158 107 ntBASIC0.3□□□□□ -2.36
NDNQ99608 RNU6-1229P-201ENST00000364295 107 ntBASIC0.3□□□□□ -2.36
NDNQ99608 RNY1P2-201ENST00000364820 117 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms