Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU7-35P-201ENST00000517174 62 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 RNU2-60P-201ENST00000517290 128 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 AC138749.4-201ENST00000563970 127 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 AC104408.1-201ENST00000605241 170 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 MIR2909-201ENST00000617113 69 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 U6.106-201ENST00000636360 105 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 U6.109-201ENST00000636749 87 ntBASIC0.03□□□□□ -2.4
ZNF560Q96MR9 SNORA9.1-201ENST00000362412 131 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNA5SP133-201ENST00000363368 119 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNA5SP457-201ENST00000363657 124 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNA5SP325-201ENST00000363756 130 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNU6-1082P-201ENST00000364574 107 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNY1P2-201ENST00000364820 117 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNY1P6-201ENST00000384193 109 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.571-201ENST00000384753 98 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 MIR643-201ENST00000385267 97 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNU6-1307P-201ENST00000391012 103 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.626-201ENST00000411288 95 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNU7-79P-201ENST00000516082 62 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNU7-129P-201ENST00000516128 62 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 RNU2-35P-201ENST00000516446 142 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 SNORD67.1-201ENST00000516618 108 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
ZNF560Q96MR9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
ZNF560Q96MR9 MIR548AE2-201ENST00000583456 67 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 MIR4639-201ENST00000584938 69 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 AL109933.3-201ENST00000619095 188 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 AC091304.10-201ENST00000641554 121 ntBASIC0.02□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.120-201ENST00000363304 110 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.182-201ENST00000363880 111 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 RNU6-702P-201ENST00000364982 107 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 RNU6-47P-201ENST00000383866 107 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 RNU6-738P-201ENST00000384531 106 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 RNU6-768P-201ENST00000384683 107 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 MIR760-201ENST00000390220 80 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 RNU7-137P-201ENST00000516788 62 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 AC008737.2-201ENST00000599446 118 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 SNORA70.25-201ENST00000612741 95 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 AC105081.1-201ENST00000617727 106 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 MIR499B-201ENST00000636498 73 ntBASIC0.01□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.60-201ENST00000362831 98 ntBASIC0□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.65-201ENST00000362846 100 ntBASIC0□□□□□ -2.41
ZNF560Q96MR9 RNU6-275P-201ENST00000364910 107 ntBASIC0□□□□□ -2.41
ZNF560Q96MR9 RNU6-1126P-201ENST00000384002 107 ntBASIC0□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.797-201ENST00000515977 94 ntBASIC0□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.668-201ENST00000516233 93 ntBASIC0□□□□□ -2.41
ZNF560Q96MR9 RNU7-161P-201ENST00000517289 62 ntBASIC0□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.01□□□□□ -2.41
ZNF560Q96MR9 RNU6-918P-201ENST00000391219 106 ntBASIC-0.01□□□□□ -2.41
ZNF560Q96MR9 SNORD58.1-201ENST00000391313 66 ntBASIC-0.01□□□□□ -2.41
ZNF560Q96MR9 RNU7-113P-201ENST00000459273 62 ntBASIC-0.01□□□□□ -2.41
ZNF560Q96MR9 MIR5190-201ENST00000581537 80 ntBASIC-0.01□□□□□ -2.41
ZNF560Q96MR9 MIR3128-201ENST00000581957 66 ntBASIC-0.01□□□□□ -2.41
ZNF560Q96MR9 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
ZNF560Q96MR9 AL360085.1-201ENST00000604713 532 ntBASIC-0.01□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 RNU6-756P-201ENST00000383997 107 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 MIR501-201ENST00000390204 84 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 RNU6-240P-201ENST00000516098 97 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 RNA5SP33-201ENST00000516687 98 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 AC022559.1-201ENST00000520905 205 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 DEFB131E-201ENST00000532329 154 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 MIR3149-201ENST00000584629 83 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 MIR3658-201ENST00000636291 56 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 SNORD115-2-201ENST00000362842 82 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 SNORD115-24-201ENST00000363528 82 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 RNU6-726P-201ENST00000364680 107 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 SNORD115-20-201ENST00000365099 82 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 RNA5SP128-201ENST00000365305 116 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 MIR593-201ENST00000384856 100 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 MTCYBP9-201ENST00000431021 303 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 RPL39P34-201ENST00000477141 156 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 RNU7-123P-201ENST00000515911 60 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 RNU6-111P-201ENST00000517179 105 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.03□□□□□ -2.41
ZNF560Q96MR9 RNU4-58P-201ENST00000363192 141 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 RNU6-690P-201ENST00000365242 106 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 RNU6-574P-201ENST00000384265 107 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms