Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RNU6-473P-201ENST00000516164 107 ntBASIC-0.02□□□□□ -2.41
ITCHQ96J02 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.02□□□□□ -2.41
ITCHQ96J02 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.02□□□□□ -2.41
ITCHQ96J02 DEFB131E-201ENST00000532329 154 ntBASIC-0.02□□□□□ -2.41
ITCHQ96J02 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
ITCHQ96J02 AC244669.1-204ENST00000621564 178 ntBASIC-0.02□□□□□ -2.41
ITCHQ96J02 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.03□□□□□ -2.41
ITCHQ96J02 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.03□□□□□ -2.41
ITCHQ96J02 RNY1P6-201ENST00000384193 109 ntBASIC-0.03□□□□□ -2.41
ITCHQ96J02 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.03□□□□□ -2.41
ITCHQ96J02 RNU7-129P-201ENST00000516128 62 ntBASIC-0.03□□□□□ -2.41
ITCHQ96J02 IGLVI-20-201ENST00000519296 130 ntBASIC-0.03□□□□□ -2.41
ITCHQ96J02 RNU2-4P-201ENST00000606190 192 ntBASIC-0.03□□□□□ -2.41
ITCHQ96J02 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.03□□□□□ -2.41
ITCHQ96J02 RNY4P3-201ENST00000365254 95 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 RNU6-643P-201ENST00000384018 107 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 RNU4-70P-201ENST00000384579 139 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 RNA5SP144-201ENST00000410846 116 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 RNU6-758P-201ENST00000516292 89 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 RNY3P16-201ENST00000516338 101 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 RNU6-531P-201ENST00000516694 104 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 RNU7-35P-201ENST00000517174 62 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 AP003072.1-201ENST00000531740 145 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 MIR4493-201ENST00000584016 73 ntBASIC-0.04□□□□□ -2.42
ITCHQ96J02 RNU4-58P-201ENST00000363192 141 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 SNORD114-31-201ENST00000363219 75 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 RNA5SP133-201ENST00000363368 119 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 SNORA25.7-201ENST00000364375 127 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 MIR760-201ENST00000390220 80 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
ITCHQ96J02 RNU6-493P-201ENST00000391321 108 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 MIR548F4-201ENST00000408515 105 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 snoU13.19-201ENST00000459148 104 ntBASIC-0.05□□□□□ -2.42
ITCHQ96J02 RNA5SP98-201ENST00000363158 137 ntBASIC-0.06□□□□□ -2.42
ITCHQ96J02 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
ITCHQ96J02 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.06□□□□□ -2.42
ITCHQ96J02 MIR610-201ENST00000385139 96 ntBASIC-0.06□□□□□ -2.42
ITCHQ96J02 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
ITCHQ96J02 RNU6-127P-201ENST00000390897 107 ntBASIC-0.06□□□□□ -2.42
ITCHQ96J02 RNU7-113P-201ENST00000459273 62 ntBASIC-0.06□□□□□ -2.42
ITCHQ96J02 AP001180.6-201ENST00000584918 159 ntBASIC-0.06□□□□□ -2.42
ITCHQ96J02 AC006504.6-201ENST00000590142 199 ntBASIC-0.06□□□□□ -2.42
ITCHQ96J02 SNORD114-5-201ENST00000362928 70 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 RNA5SP245-201ENST00000364239 121 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 RNA5SP128-201ENST00000365305 116 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 MIR548H3-201ENST00000408771 118 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 RNU2-38P-201ENST00000410856 79 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.07□□□□□ -2.42
ITCHQ96J02 MTND1P19-201ENST00000511780 315 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.07□□□□□ -2.42
ITCHQ96J02 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 U6.109-201ENST00000636749 87 ntBASIC-0.07□□□□□ -2.42
ITCHQ96J02 MIR101-2-201ENST00000362195 79 ntBASIC-0.08□□□□□ -2.42
ITCHQ96J02 SNORA63.5-201ENST00000363548 123 ntBASIC-0.08□□□□□ -2.42
ITCHQ96J02 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.08□□□□□ -2.42
ITCHQ96J02 RNY4P28-201ENST00000365281 93 ntBASIC-0.08□□□□□ -2.42
ITCHQ96J02 RNA5SP33-201ENST00000516687 98 ntBASIC-0.08□□□□□ -2.42
ITCHQ96J02 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.08□□□□□ -2.42
ITCHQ96J02 AC141557.1-201ENST00000540982 400 ntBASIC-0.08□□□□□ -2.42
ITCHQ96J02 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 SNORD115-2-201ENST00000362842 82 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 RNA5SP368-201ENST00000364298 116 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 SNORD115-20-201ENST00000365099 82 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 SNORA32-201ENST00000384072 121 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 MIR214-201ENST00000385214 110 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 MIR643-201ENST00000385267 97 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 MIR4752-201ENST00000579672 72 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.09□□□□□ -2.42
ITCHQ96J02 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 RNU6-275P-201ENST00000364910 107 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 MIR604-201ENST00000384880 94 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 SNORD127-201ENST00000458892 86 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 RPL39P34-201ENST00000477141 156 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 RNU7-137P-201ENST00000516788 62 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 AL117187.1-201ENST00000555482 181 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 AC138749.4-201ENST00000563970 127 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.1□□□□□ -2.43
ITCHQ96J02 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 SNORD115-24-201ENST00000363528 82 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 SNORD114-15-201ENST00000364687 72 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
ITCHQ96J02 MIR4308-201ENST00000580634 81 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 AC108676.2-201ENST00000605225 163 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 RNU1-29P-201ENST00000606574 126 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 AC098479.1-201ENST00000609225 154 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 MIR499B-201ENST00000636498 73 ntBASIC-0.11□□□□□ -2.43
ITCHQ96J02 MIR101-1-201ENST00000362265 75 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 237.4 ms