Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TRIM11Q96F44 Y_RNA.119-201ENST00000363301 96 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 RNU6-243P-201ENST00000391140 107 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 AL356379.1-201ENST00000414105 126 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 HMGN2P38-201ENST00000423806 265 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 AC079804.2-201ENST00000490376 200 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 MIR514B-201ENST00000516774 80 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 MIR4529-201ENST00000578110 78 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 MIR664A-201ENST00000626086 82 ntBASIC2.4□□□□□ -2.03
TRIM11Q96F44 AC131280.1-202ENST00000624067 4211 ntBASIC2.39□□□□□ -2.03
TRIM11Q96F44 RNU6-471P-201ENST00000383944 106 ntBASIC2.39□□□□□ -2.03
TRIM11Q96F44 RNU4-52P-201ENST00000384209 138 ntBASIC2.39□□□□□ -2.03
TRIM11Q96F44 RNU6-987P-201ENST00000384759 104 ntBASIC2.39□□□□□ -2.03
TRIM11Q96F44 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TRIM11Q96F44 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM11Q96F44 AP006437.1-201ENST00000641440 3685 ntBASIC2.39□□□□□ -2.03
TRIM11Q96F44 RNU6-466P-201ENST00000391224 103 ntBASIC2.38□□□□□ -2.03
TRIM11Q96F44 AC244023.1-201ENST00000426884 112 ntBASIC2.38□□□□□ -2.03
TRIM11Q96F44 RNU7-41P-201ENST00000515917 61 ntBASIC2.38□□□□□ -2.03
TRIM11Q96F44 AC242498.1-201ENST00000604134 111 ntBASIC2.38□□□□□ -2.03
TRIM11Q96F44 AL096861.1-201ENST00000610899 123 ntBASIC2.38□□□□□ -2.03
TRIM11Q96F44 MIR6132-201ENST00000622083 109 ntBASIC2.38□□□□□ -2.03
TRIM11Q96F44 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM11Q96F44 Y_RNA.12-201ENST00000362393 112 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 RNU6-1241P-201ENST00000384536 107 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 MIR516A2-201ENST00000384888 90 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 MIR516A1-201ENST00000385033 90 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 MIR563-201ENST00000385080 79 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 AC009474.2-201ENST00000451383 136 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 RNA5SP233-201ENST00000459153 113 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 RNA5SP445-201ENST00000515889 115 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 YWHAEP2-201ENST00000580066 112 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 YWHAEP3-201ENST00000582767 121 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 SNORA4-201ENST00000584302 138 ntBASIC2.37□□□□□ -2.03
TRIM11Q96F44 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
TRIM11Q96F44 RNU6-1123P-201ENST00000362347 106 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 SNORA67.4-201ENST00000384688 142 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 MIR588-201ENST00000384900 83 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 MIR154-201ENST00000385243 84 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 AC245517.4-201ENST00000448601 281 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 AC104435.1-201ENST00000483483 166 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 RNA5SP200-201ENST00000516360 103 ntBASIC2.36□□□□□ -2.03
TRIM11Q96F44 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM11Q96F44 RNA5SP48-201ENST00000363969 126 ntBASIC2.35□□□□□ -2.03
TRIM11Q96F44 MIR17-201ENST00000385012 84 ntBASIC2.35□□□□□ -2.03
TRIM11Q96F44 RNU6-663P-201ENST00000391105 106 ntBASIC2.35□□□□□ -2.03
TRIM11Q96F44 RNU4-37P-201ENST00000410214 84 ntBASIC2.35□□□□□ -2.03
TRIM11Q96F44 RNU6-322P-201ENST00000516010 103 ntBASIC2.35□□□□□ -2.03
TRIM11Q96F44 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.35□□□□□ -2.03
TRIM11Q96F44 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.35□□□□□ -2.03
TRIM11Q96F44 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM11Q96F44 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM11Q96F44 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM11Q96F44 MIRLET7F1-201ENST00000362202 87 ntBASIC2.34□□□□□ -2.03
TRIM11Q96F44 RNU6-301P-201ENST00000384277 107 ntBASIC2.34□□□□□ -2.03
TRIM11Q96F44 MIR518E-201ENST00000385252 88 ntBASIC2.34□□□□□ -2.03
TRIM11Q96F44 MIR653-201ENST00000385279 96 ntBASIC2.34□□□□□ -2.03
TRIM11Q96F44 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM11Q96F44 MTND4LP19-201ENST00000403051 166 ntBASIC2.34□□□□□ -2.03
TRIM11Q96F44 SNORA59A-201ENST00000459326 152 ntBASIC2.34□□□□□ -2.03
TRIM11Q96F44 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
TRIM11Q96F44 AL359851.1-201ENST00000569460 4997 ntBASIC2.34□□□□□ -2.04
TRIM11Q96F44 AL161722.3-201ENST00000605789 2983 ntBASIC2.34□□□□□ -2.04
TRIM11Q96F44 Y_RNA.36-201ENST00000362602 112 ntBASIC2.33□□□□□ -2.04
TRIM11Q96F44 SNORA8.1-201ENST00000384250 140 ntBASIC2.33□□□□□ -2.04
TRIM11Q96F44 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
TRIM11Q96F44 PRELID3BP2-201ENST00000605362 201 ntBASIC2.33□□□□□ -2.04
TRIM11Q96F44 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.33□□□□□ -2.04
TRIM11Q96F44 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM11Q96F44 SNORD115-31-201ENST00000365318 82 ntBASIC2.32□□□□□ -2.04
TRIM11Q96F44 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
TRIM11Q96F44 MIR942-201ENST00000401111 86 ntBASIC2.32□□□□□ -2.04
TRIM11Q96F44 AC093423.1-201ENST00000440817 142 ntBASIC2.32□□□□□ -2.04
TRIM11Q96F44 MIR4448-201ENST00000584360 86 ntBASIC2.32□□□□□ -2.04
TRIM11Q96F44 ZNF658B-202ENST00000615961 3375 ntBASIC2.32□□□□□ -2.04
TRIM11Q96F44 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TRIM11Q96F44 MIR30D-201ENST00000362283 70 ntBASIC2.31□□□□□ -2.04
TRIM11Q96F44 RNA5SP276-201ENST00000362580 94 ntBASIC2.31□□□□□ -2.04
TRIM11Q96F44 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM11Q96F44 SNORD90-201ENST00000391145 111 ntBASIC2.31□□□□□ -2.04
TRIM11Q96F44 RNU7-156P-201ENST00000517214 74 ntBASIC2.31□□□□□ -2.04
TRIM11Q96F44 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM11Q96F44 MIR6740-201ENST00000618268 113 ntBASIC2.31□□□□□ -2.04
TRIM11Q96F44 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM11Q96F44 RNU6-957P-201ENST00000363652 99 ntBASIC2.3□□□□□ -2.04
TRIM11Q96F44 RNU6-360P-201ENST00000390944 104 ntBASIC2.3□□□□□ -2.04
TRIM11Q96F44 RNU7-106P-201ENST00000459514 67 ntBASIC2.3□□□□□ -2.04
TRIM11Q96F44 SNORD111.1-201ENST00000516421 86 ntBASIC2.3□□□□□ -2.04
TRIM11Q96F44 U1.36-201ENST00000620684 176 ntBASIC2.3□□□□□ -2.04
TRIM11Q96F44 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM11Q96F44 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM11Q96F44 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM11Q96F44 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM11Q96F44 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
TRIM11Q96F44 DEFB122-202ENST00000569013 197 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms