Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC105081.1-201ENST00000617727 106 ntBASIC1.86□□□□□ -2.11
CHFRQ96EP1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.86□□□□□ -2.11
CHFRQ96EP1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
CHFRQ96EP1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHFRQ96EP1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHFRQ96EP1 MIR597-201ENST00000384968 97 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 MIR181B2-201ENST00000385004 89 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CHFRQ96EP1 MIR1283-2-201ENST00000408621 87 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 RNU4-62P-201ENST00000410125 130 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 AC004223.1-201ENST00000479840 271 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 RNU7-153P-201ENST00000516455 62 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.85□□□□□ -2.11
CHFRQ96EP1 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 FAM106DP-201ENST00000586416 501 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 snoU13.31-201ENST00000607291 104 ntBASIC1.85□□□□□ -2.11
CHFRQ96EP1 RNU6-478P-201ENST00000363904 110 ntBASIC1.84□□□□□ -2.11
CHFRQ96EP1 AC087499.7-201ENST00000441958 109 ntBASIC1.84□□□□□ -2.11
CHFRQ96EP1 RNU7-79P-201ENST00000516082 62 ntBASIC1.84□□□□□ -2.11
CHFRQ96EP1 RNU7-137P-201ENST00000516788 62 ntBASIC1.84□□□□□ -2.11
CHFRQ96EP1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.84□□□□□ -2.11
CHFRQ96EP1 AC012676.2-201ENST00000619258 186 ntBASIC1.84□□□□□ -2.11
CHFRQ96EP1 Y_RNA.788-201ENST00000622394 112 ntBASIC1.84□□□□□ -2.11
CHFRQ96EP1 SNORD3E-202ENST00000627253 216 ntBASIC1.84□□□□□ -2.11
CHFRQ96EP1 MIR378A-201ENST00000362177 66 ntBASIC1.83□□□□□ -2.12
CHFRQ96EP1 SNORA2B-201ENST00000384583 137 ntBASIC1.83□□□□□ -2.12
CHFRQ96EP1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.83□□□□□ -2.12
CHFRQ96EP1 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
CHFRQ96EP1 RNU6-1086P-201ENST00000410930 100 ntBASIC1.83□□□□□ -2.12
CHFRQ96EP1 SPINT5P-201ENST00000448174 155 ntBASIC1.83□□□□□ -2.12
CHFRQ96EP1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.83□□□□□ -2.12
CHFRQ96EP1 RNU6-865P-201ENST00000364772 107 ntBASIC1.82□□□□□ -2.12
CHFRQ96EP1 RNA5SP501-201ENST00000410990 112 ntBASIC1.82□□□□□ -2.12
CHFRQ96EP1 RNU6-602P-201ENST00000411155 105 ntBASIC1.82□□□□□ -2.12
CHFRQ96EP1 AP1B1P2-201ENST00000416196 106 ntBASIC1.82□□□□□ -2.12
CHFRQ96EP1 snoU13.16-201ENST00000459350 104 ntBASIC1.82□□□□□ -2.12
CHFRQ96EP1 AC099513.1-201ENST00000490423 301 ntBASIC1.82□□□□□ -2.12
CHFRQ96EP1 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.82□□□□□ -2.12
CHFRQ96EP1 Z97988.1-201ENST00000637697 135 ntBASIC1.82□□□□□ -2.12
CHFRQ96EP1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.81□□□□□ -2.12
CHFRQ96EP1 RNU6-315P-201ENST00000362666 107 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 RNA5SP133-201ENST00000363368 119 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 SNORD114-10-201ENST00000363409 72 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 MIR30A-201ENST00000385092 71 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 RNU7-48P-201ENST00000458875 63 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 RNVU1-2-201ENST00000516326 135 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 SNORA25.13-201ENST00000516395 103 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 RNA5SP437-201ENST00000517249 129 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
CHFRQ96EP1 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 AC021506.2-201ENST00000612354 169 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 U7.4-201ENST00000614961 63 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.81□□□□□ -2.12
CHFRQ96EP1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.81□□□□□ -2.12
CHFRQ96EP1 Y_RNA.57-201ENST00000362806 113 ntBASIC1.8□□□□□ -2.12
CHFRQ96EP1 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
CHFRQ96EP1 AL450471.1-201ENST00000447509 127 ntBASIC1.8□□□□□ -2.12
CHFRQ96EP1 RNU6-917P-201ENST00000516294 104 ntBASIC1.8□□□□□ -2.12
CHFRQ96EP1 MIR4781-201ENST00000585250 76 ntBASIC1.8□□□□□ -2.12
CHFRQ96EP1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.8□□□□□ -2.12
CHFRQ96EP1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CHFRQ96EP1 RNU6-624P-201ENST00000363411 107 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 RNY1P13-201ENST00000365030 105 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 RNU6-950P-201ENST00000384651 107 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 Y_RNA.545-201ENST00000384652 105 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 MIR660-201ENST00000385235 97 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 RNU6-129P-201ENST00000391022 107 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 RNU6-321P-201ENST00000410912 106 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 AC114801.3-201ENST00000510231 177 ntBASIC1.79□□□□□ -2.12
CHFRQ96EP1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
CHFRQ96EP1 Y_RNA.98-201ENST00000363109 102 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 SNORD115-37-201ENST00000363768 82 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 SNORA48.1-201ENST00000390879 135 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-447P-201ENST00000410293 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-1118P-201ENST00000410382 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-1076P-201ENST00000410397 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-355P-201ENST00000410427 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-791P-201ENST00000410467 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-519P-201ENST00000410590 108 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-705P-201ENST00000410601 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-1100P-201ENST00000410691 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-860P-201ENST00000410860 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-1217P-201ENST00000411276 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 RNU6-785P-201ENST00000411324 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 SNORD4B-201ENST00000459083 72 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 SNORA74.3-201ENST00000517108 154 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 MTND5P40-201ENST00000559945 246 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 U6.90-201ENST00000614007 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 U6.70-201ENST00000620287 104 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 AL513423.1-201ENST00000621695 132 ntBASIC1.78□□□□□ -2.12
CHFRQ96EP1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHFRQ96EP1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CHFRQ96EP1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
CHFRQ96EP1 HSBP1P2-201ENST00000299671 229 ntBASIC1.77□□□□□ -2.13
CHFRQ96EP1 RNU6-480P-201ENST00000384332 107 ntBASIC1.77□□□□□ -2.13
CHFRQ96EP1 RNU6-296P-201ENST00000384608 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms