Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 Y_RNA.171-201ENST00000363760 102 ntBASIC0.4□□□□□ -2.35
SNRNP40Q96DI7 RNU6-818P-201ENST00000364837 108 ntBASIC0.4□□□□□ -2.35
SNRNP40Q96DI7 SNORD71-201ENST00000411292 86 ntBASIC0.4□□□□□ -2.35
SNRNP40Q96DI7 RNU6-765P-201ENST00000516916 99 ntBASIC0.4□□□□□ -2.35
SNRNP40Q96DI7 RNU6-1271P-201ENST00000517049 105 ntBASIC0.4□□□□□ -2.35
SNRNP40Q96DI7 MIR2909-201ENST00000617113 69 ntBASIC0.4□□□□□ -2.35
SNRNP40Q96DI7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.4□□□□□ -2.35
SNRNP40Q96DI7 uc_338.16-201ENST00000621804 95 ntBASIC0.4□□□□□ -2.35
SNRNP40Q96DI7 SNORD115-2-201ENST00000362842 82 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 RNU4-84P-201ENST00000364200 139 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.240-201ENST00000364469 95 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 RNU6-200P-201ENST00000364743 107 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 RNY1P13-201ENST00000365030 105 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 SNORD115-20-201ENST00000365099 82 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.497-201ENST00000384447 98 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 SNORA72.6-201ENST00000384520 129 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 RNU6-239P-201ENST00000390990 99 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 MIR4514-201ENST00000581410 57 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 AC011603.4-201ENST00000611325 277 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 MIR6082-201ENST00000613604 109 ntBASIC0.39□□□□□ -2.35
SNRNP40Q96DI7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.552-201ENST00000384665 112 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 SNORA25.12-201ENST00000516202 82 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 RNU7-35P-201ENST00000517174 62 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 RNU2-60P-201ENST00000517290 128 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 MIR4491-201ENST00000581087 68 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 AC078938.1-201ENST00000620993 318 ntBASIC0.38□□□□□ -2.35
SNRNP40Q96DI7 RNA5SP62-201ENST00000363457 110 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.470-201ENST00000384307 117 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.793-201ENST00000411222 111 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 RNU7-120P-201ENST00000459334 63 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.700-201ENST00000516806 100 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 RNA5SP94-201ENST00000516917 108 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 AP002392.1-201ENST00000537692 208 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 MIR6844-201ENST00000637122 62 ntBASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.120-201ENST00000363304 110 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 RNU6-1318P-201ENST00000365389 103 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.357-201ENST00000365487 109 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.441-201ENST00000384123 112 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 MIR644A-201ENST00000385262 94 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 snosnR66.1-201ENST00000391095 99 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 AL022718.1-201ENST00000412004 84 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 MTATP6P21-201ENST00000440681 189 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 RNU7-113P-201ENST00000459273 62 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 RNU6-138P-201ENST00000515952 107 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 MIR3678-201ENST00000578455 94 ntBASIC0.36□□□□□ -2.35
SNRNP40Q96DI7 RNU6-682P-201ENST00000363843 106 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 RNA5SP517-201ENST00000364724 117 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 RNU6-690P-201ENST00000365242 106 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 SNORA32-201ENST00000384072 121 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 RNU6-588P-201ENST00000410281 105 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 RNU6-1135P-201ENST00000411083 103 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 RNU7-79P-201ENST00000516082 62 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 RNU6-388P-201ENST00000517012 105 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 RNU6-389P-201ENST00000517048 105 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 AC133485.4-201ENST00000561835 220 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 DNAJC19P2-201ENST00000593340 302 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 SNORA25.18-201ENST00000607153 114 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 MIR3658-201ENST00000636291 56 ntBASIC0.35□□□□□ -2.35
SNRNP40Q96DI7 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
SNRNP40Q96DI7 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
SNRNP40Q96DI7 RNU6-469P-201ENST00000516253 101 ntBASIC0.34□□□□□ -2.36
SNRNP40Q96DI7 RNU2-35P-201ENST00000516446 142 ntBASIC0.34□□□□□ -2.36
SNRNP40Q96DI7 SNORA25.16-201ENST00000516741 121 ntBASIC0.34□□□□□ -2.36
SNRNP40Q96DI7 MIR4305-201ENST00000583252 102 ntBASIC0.34□□□□□ -2.36
SNRNP40Q96DI7 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.34□□□□□ -2.36
SNRNP40Q96DI7 RNU6-508P-201ENST00000363231 103 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 RNY1P11-201ENST00000363759 113 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.785-201ENST00000384290 109 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.531-201ENST00000384589 121 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 MIR518A1-201ENST00000385068 85 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 AL512326.2-201ENST00000426359 151 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 RNA5SP33-201ENST00000516687 98 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 RNU6-861P-201ENST00000516745 106 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 DEFB131E-201ENST00000532329 154 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 MTND5P34-201ENST00000568888 325 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.29-201ENST00000362570 113 ntBASIC0.32□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.32□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.32□□□□□ -2.36
SNRNP40Q96DI7 RNA5SP63-201ENST00000391225 112 ntBASIC0.32□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.651-201ENST00000459380 103 ntBASIC0.32□□□□□ -2.36
SNRNP40Q96DI7 RNU6-240P-201ENST00000516098 97 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms