| FOXJ1 | Q92949 | PCM1-222 | ENST00000524226 | 5955 nt | TSL 1 (best) BASIC | 2.56 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.55 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | SNORD77.2-201 | ENST00000391045 | 68 nt | BASIC | 2.55 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNU6-466P-201 | ENST00000391224 | 103 nt | BASIC | 2.55 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | AC035139.1-201 | ENST00000423256 | 273 nt | TSL 3 BASIC | 2.55 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | AC245517.4-201 | ENST00000448601 | 281 nt | BASIC | 2.55 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNU7-62P-201 | ENST00000458856 | 62 nt | BASIC | 2.55 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.55 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 2.55 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNU6-53P-201 | ENST00000365367 | 106 nt | BASIC | 2.54 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | MIR504-201 | ENST00000385065 | 83 nt | BASIC | 2.54 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RPL30P7-201 | ENST00000479312 | 323 nt | BASIC | 2.54 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RN7SL274P-201 | ENST00000492268 | 272 nt | BASIC | 2.54 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNU6-922P-201 | ENST00000516753 | 99 nt | BASIC | 2.54 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNU6-250P-201 | ENST00000516958 | 103 nt | BASIC | 2.54 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | ZNF654-201 | ENST00000309495 | 4957 nt | APPRIS P2 TSL 1 (best) BASIC | 2.54 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | TAB2-201 | ENST00000367456 | 4553 nt | APPRIS P1 TSL 5 BASIC | 2.53 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNA5SP393-201 | ENST00000363423 | 117 nt | BASIC | 2.53 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | SNORA3A-201 | ENST00000364113 | 130 nt | BASIC | 2.53 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | Y_RNA.491-201 | ENST00000384417 | 107 nt | BASIC | 2.53 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | MIR520H-201 | ENST00000385126 | 88 nt | BASIC | 2.53 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNU7-193P-201 | ENST00000516723 | 65 nt | BASIC | 2.53 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | RNU11-2P-201 | ENST00000516898 | 142 nt | BASIC | 2.53 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | GHRLOS.1-201 | ENST00000610995 | 70 nt | BASIC | 2.53 | □□□□□ -2 | | |
| FOXJ1 | Q92949 | AGTPBP1-205 | ENST00000376083 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 2.52 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR377-201 | ENST00000362145 | 69 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU4-58P-201 | ENST00000363192 | 141 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-132P-201 | ENST00000383863 | 107 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU1-52P-201 | ENST00000384190 | 164 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | TRAJ26-201 | ENST00000390511 | 60 nt | APPRIS P1 BASIC | 2.52 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6ATAC37P-201 | ENST00000408328 | 131 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR7843-201 | ENST00000622274 | 79 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AC130466.1-201 | ENST00000636354 | 4683 nt | TSL 5 BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | PIK3CA-201 | ENST00000263967 | 9093 nt | APPRIS P1 TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-205P-201 | ENST00000390858 | 107 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AL356320.1-201 | ENST00000429616 | 163 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AC074131.1-201 | ENST00000514662 | 253 nt | TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-237P-201 | ENST00000515985 | 71 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | Y_RNA.681-201 | ENST00000516445 | 113 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-448P-201 | ENST00000517052 | 107 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-1015P-201 | ENST00000517121 | 99 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU2-19P-201 | ENST00000517288 | 84 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | PRKD3-201 | ENST00000234179 | 5900 nt | APPRIS P1 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RGPD6-201 | ENST00000329516 | 7165 nt | APPRIS P1 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | SNORA25.3-201 | ENST00000363205 | 127 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | Y_RNA.532-201 | ENST00000384590 | 113 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR635-201 | ENST00000384830 | 98 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | TRAJ42-201 | ENST00000390495 | 66 nt | APPRIS P1 BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNA5SP212-201 | ENST00000391223 | 107 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | snoU13.15-201 | ENST00000459407 | 104 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR5194-201 | ENST00000582634 | 120 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNA5SP289-201 | ENST00000362332 | 137 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-208P-201 | ENST00000362431 | 107 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR518E-201 | ENST00000385252 | 88 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AL359511.1-201 | ENST00000402970 | 211 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AC015818.7-201 | ENST00000428754 | 109 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU7-106P-201 | ENST00000459514 | 67 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-1194P-201 | ENST00000516208 | 104 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-303P-201 | ENST00000517091 | 106 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AP003716.2-201 | ENST00000528260 | 108 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR4648-201 | ENST00000580107 | 72 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR4491-201 | ENST00000581087 | 68 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | WARS-244 | ENST00000627608 | 123 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | DENND4A-202 | ENST00000443035 | 8665 nt | TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | SNORD63B-201 | ENST00000411005 | 70 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR18B-201 | ENST00000454574 | 71 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AL133373.1-201 | ENST00000497098 | 94 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-70P-201 | ENST00000516438 | 60 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-531P-201 | ENST00000516694 | 104 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | ZMYM1-203 | ENST00000373330 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AL161722.3-201 | ENST00000605789 | 2983 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU5F-1-201 | ENST00000362507 | 117 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6ATAC3P-201 | ENST00000387974 | 126 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AC074348.1-201 | ENST00000426503 | 132 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-634P-201 | ENST00000459134 | 106 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | AC015688.6-201 | ENST00000577737 | 104 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | MIR6516-201 | ENST00000630554 | 81 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | NEB-203 | ENST00000397345 | 26202 nt | APPRIS ALT2 TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | NEB-209 | ENST00000427231 | 26202 nt | APPRIS ALT2 TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| FOXJ1 | Q92949 | RNU6-580P-201 | ENST00000365159 | 107 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | Y_RNA.588-201 | ENST00000391254 | 102 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | snoU13.25-201 | ENST00000458945 | 104 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | SNORA31.11-201 | ENST00000516528 | 139 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | MIR4524B-201 | ENST00000581569 | 115 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | MIR5092-201 | ENST00000583139 | 88 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | SNRPGP19-201 | ENST00000603826 | 189 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | DYNC2H1-202 | ENST00000375735 | 13678 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | Z82195.2-201 | ENST00000612348 | 18351 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | MIRLET7F1-201 | ENST00000362202 | 87 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | RNU6-957P-201 | ENST00000363652 | 99 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | MIR519A1-201 | ENST00000385257 | 85 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | SNORD93-201 | ENST00000408813 | 74 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | AC125388.1-201 | ENST00000459631 | 156 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | AC055731.1-201 | ENST00000474387 | 401 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | RNU6-687P-201 | ENST00000516443 | 89 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | SNORA25.16-201 | ENST00000516741 | 121 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| FOXJ1 | Q92949 | MIR4484-201 | ENST00000582855 | 83 nt | BASIC | 2.45 | □□□□□ -2.02 | | |