Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MIR539-201ENST00000365690 78 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
TOPBP1Q92547 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.1□□□□□ -2.59
TOPBP1Q92547 AC093423.1-201ENST00000440817 142 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 MTND1P29-201ENST00000448112 647 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 AP000676.1-201ENST00000533307 52 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 AC133104.2-201ENST00000615272 193 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 AC002553.4-201ENST00000616896 331 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 MIR3688-2-201ENST00000636963 87 ntBASIC-1.1□□□□□ -2.59
TOPBP1Q92547 MIR20A-201ENST00000362279 71 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 SNORD115-2-201ENST00000362842 82 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 SNORD115-20-201ENST00000365099 82 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 RNU6-154P-201ENST00000384306 106 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 MIR617-201ENST00000385030 97 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 MTND4P17-201ENST00000470444 350 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 SNORA40.14-201ENST00000516543 86 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 RNU6-881P-201ENST00000516813 102 ntBASIC-1.11□□□□□ -2.59
TOPBP1Q92547 SNORA32-201ENST00000384072 121 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 MIR519E-201ENST00000385075 84 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 MIR548I2-201ENST00000408348 149 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 SPINT5P-201ENST00000448174 155 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 SNORD38.3-201ENST00000516599 73 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 SNORD116.3-201ENST00000517176 78 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 AL359881.1-201ENST00000602916 267 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 AC025253.1-201ENST00000613623 543 ntBASIC-1.12□□□□□ -2.59
TOPBP1Q92547 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.13□□□□□ -2.59
TOPBP1Q92547 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.13□□□□□ -2.59
TOPBP1Q92547 MIR196A1-201ENST00000388006 70 ntBASIC-1.13□□□□□ -2.59
TOPBP1Q92547 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.13□□□□□ -2.59
TOPBP1Q92547 AL731563.1-201ENST00000442202 214 ntBASIC-1.13□□□□□ -2.59
TOPBP1Q92547 RNU7-195P-201ENST00000458793 62 ntBASIC-1.13□□□□□ -2.59
TOPBP1Q92547 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.13□□□□□ -2.59
TOPBP1Q92547 MIR4460-201ENST00000577862 86 ntBASIC-1.13□□□□□ -2.59
TOPBP1Q92547 RNU4-90P-201ENST00000362773 141 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 HSPE1P25-201ENST00000455484 251 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 SNORA27.4-201ENST00000516650 95 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.14□□□□□ -2.59
TOPBP1Q92547 RNU6-524P-201ENST00000384270 107 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 SNORD56B-201ENST00000384713 71 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 SNORA13-201ENST00000458790 133 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNA5SP461-201ENST00000516451 104 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 MIR548AE1-201ENST00000583292 70 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 AL138825.1-201ENST00000618587 192 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNU6-845P-201ENST00000362578 103 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNA5SP192-201ENST00000364404 120 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNU6-662P-201ENST00000384253 104 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 SNORD63B-201ENST00000411005 70 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNU6-130P-201ENST00000411112 103 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 SNORA20.3-201ENST00000516880 132 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 AL008718.3-201ENST00000610217 321 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 MIR6851-201ENST00000617060 67 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 AP000770.2-201ENST00000623694 100 ntBASIC-1.15□□□□□ -2.59
TOPBP1Q92547 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 MIR518B-201ENST00000385127 83 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 AL606845.1-201ENST00000404881 255 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 RNA5SP144-201ENST00000410846 116 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 AL365205.2-201ENST00000594586 68 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 RNU6-86P-201ENST00000606534 107 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 AC011603.4-201ENST00000611325 277 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 U4.5-201ENST00000617137 123 ntBASIC-1.16□□□□□ -2.6
TOPBP1Q92547 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 RNY4P7-201ENST00000364600 96 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 MIR519A1-201ENST00000385257 85 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 AC098614.3-201ENST00000438957 440 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 SCARNA15-202ENST00000516881 127 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.17□□□□□ -2.6
TOPBP1Q92547 MIR548AG2-201ENST00000581228 64 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 AL606534.2-204ENST00000635008 178 ntBASIC-1.17□□□□□ -2.6
TOPBP1Q92547 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.18□□□□□ -2.6
TOPBP1Q92547 SNORD83B-201ENST00000386745 93 ntBASIC-1.18□□□□□ -2.6
TOPBP1Q92547 SNORA79-201ENST00000408376 140 ntBASIC-1.18□□□□□ -2.6
TOPBP1Q92547 AC016907.1-201ENST00000419483 435 ntBASIC-1.18□□□□□ -2.6
TOPBP1Q92547 RNU7-106P-201ENST00000459514 67 ntBASIC-1.18□□□□□ -2.6
TOPBP1Q92547 SCARNA17-201ENST00000516183 144 ntBASIC-1.18□□□□□ -2.6
TOPBP1Q92547 RNU6-453P-201ENST00000516819 85 ntBASIC-1.18□□□□□ -2.6
TOPBP1Q92547 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 RNY1P6-201ENST00000384193 109 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 RNU6-102P-201ENST00000384485 104 ntBASIC-1.19□□□□□ -2.6
TOPBP1Q92547 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms