Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 Y_RNA.342-201ENST00000365352 113 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 MIR206-201ENST00000384872 86 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-1086P-201ENST00000410930 100 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 AC244023.1-201ENST00000426884 112 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 SNORA44.1-201ENST00000517031 108 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 AL357312.1-201ENST00000603879 298 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 AC242498.1-201ENST00000604134 111 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 AC091304.10-201ENST00000641554 121 ntBASIC1.55□□□□□ -2.16
SLC44A3Q8N4M1 AC004941.2-201ENST00000427009 228 ntBASIC1.54□□□□□ -2.16
SLC44A3Q8N4M1 UBL5P1-201ENST00000507979 193 ntBASIC1.54□□□□□ -2.16
SLC44A3Q8N4M1 RNU7-2P-201ENST00000516096 62 ntBASIC1.54□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
SLC44A3Q8N4M1 AC012531.4-201ENST00000616509 177 ntBASIC1.54□□□□□ -2.16
SLC44A3Q8N4M1 MALAT1.1-201ENST00000618249 95 ntBASIC1.54□□□□□ -2.16
SLC44A3Q8N4M1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.54□□□□□ -2.16
SLC44A3Q8N4M1 Y_RNA.10-201ENST00000362371 110 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 SNORD114-26-201ENST00000363543 72 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-53P-201ENST00000365367 106 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 SNORD114-22-201ENST00000365423 72 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 SNORD38B-201ENST00000384690 67 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 SNORD67.1-201ENST00000516618 108 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 RNU7-137P-201ENST00000516788 62 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 MIR548Z-201ENST00000584743 97 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 SNORD38B-202ENST00000625943 69 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 MIR2052-201ENST00000636055 55 ntBASIC1.53□□□□□ -2.16
SLC44A3Q8N4M1 RNU6-170P-201ENST00000362832 104 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 Y_RNA.247-201ENST00000364500 92 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 RNY1P13-201ENST00000365030 105 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 RNY1P7-201ENST00000384743 110 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 MIR563-201ENST00000385080 79 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 AC008834.1-201ENST00000511612 175 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 RNU7-79P-201ENST00000516082 62 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-795P-201ENST00000516323 103 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 MIR3198-2-201ENST00000577868 80 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 MIR4777-201ENST00000583710 86 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 AL442128.1-201ENST00000615151 90 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 AL662814.1-201ENST00000617364 121 ntBASIC1.52□□□□□ -2.17
SLC44A3Q8N4M1 SNORA25.3-201ENST00000363205 127 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 RNA5SP325-201ENST00000363756 130 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 MIR1185-1-201ENST00000408598 86 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-165P-201ENST00000517170 99 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 AC141846.1-201ENST00000568348 142 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.51□□□□□ -2.17
SLC44A3Q8N4M1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 SNORD114-10-201ENST00000363409 72 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 Y_RNA.290-201ENST00000364879 114 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-294P-201ENST00000364999 102 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 MIR34C-201ENST00000384831 77 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 MIR30A-201ENST00000385092 71 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-1321P-201ENST00000390905 107 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 snoU13.2-201ENST00000459201 104 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-844P-201ENST00000517175 102 ntBASIC1.5□□□□□ -2.17
SLC44A3Q8N4M1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 Y_RNA.95-201ENST00000363079 95 ntBASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-644P-201ENST00000391155 98 ntBASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 MIR934-201ENST00000401241 83 ntBASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 AC027119.1-201ENST00000440877 241 ntBASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 RNU7-61P-201ENST00000515897 61 ntBASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 MIR376B-201ENST00000614515 100 ntBASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 MIR6740-201ENST00000618268 113 ntBASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 MIR8063-201ENST00000621930 81 ntBASIC1.49□□□□□ -2.17
SLC44A3Q8N4M1 SNORD45B-201ENST00000364617 72 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 Y_RNA.448-201ENST00000384185 108 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 MT-TN-201ENST00000387400 73 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 MIR1302-4-201ENST00000408701 150 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 snoU13.9-201ENST00000458927 103 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 SNORA72.7-201ENST00000516349 94 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 MIR4264-201ENST00000583520 66 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 MIR6515-201ENST00000619843 57 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 AL512310.12-203ENST00000640543 90 ntBASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SLC44A3Q8N4M1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 MIR377-201ENST00000362145 69 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 Y_RNA.220-201ENST00000364244 109 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 SNORD73B-201ENST00000364394 72 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-949P-201ENST00000384040 107 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 Y_RNA.558-201ENST00000384685 113 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 MRPL35P3-201ENST00000421557 364 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 AL133373.1-201ENST00000497098 94 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 RNU6-762P-201ENST00000517107 102 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 MIR6078-201ENST00000611069 100 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 uc_338.6-201ENST00000613544 171 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 MIR6779-201ENST00000617283 64 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 AC105081.1-201ENST00000617727 106 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 SEPT14P17-201ENST00000617978 177 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 253 ms