Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.22□□□□□ -2.05
DEPDC4Q8N2C3 MIR21-201ENST00000362134 72 ntBASIC2.22□□□□□ -2.05
DEPDC4Q8N2C3 RNU6-571P-201ENST00000384128 107 ntBASIC2.22□□□□□ -2.05
DEPDC4Q8N2C3 RPL23AP42-201ENST00000471152 471 ntBASIC2.22□□□□□ -2.05
DEPDC4Q8N2C3 AL513043.2-201ENST00000573941 143 ntBASIC2.22□□□□□ -2.05
DEPDC4Q8N2C3 AC090897.1-201ENST00000580909 226 ntBASIC2.22□□□□□ -2.05
DEPDC4Q8N2C3 MIR4422-201ENST00000581938 83 ntBASIC2.22□□□□□ -2.05
DEPDC4Q8N2C3 U6.109-201ENST00000636749 87 ntBASIC2.22□□□□□ -2.05
DEPDC4Q8N2C3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-497P-201ENST00000365316 104 ntBASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 MIR181B2-201ENST00000385004 89 ntBASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-1275P-201ENST00000391087 107 ntBASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 AL161932.1-201ENST00000437408 146 ntBASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 MIR5588-201ENST00000581890 63 ntBASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 MIR3202-2-201ENST00000635980 79 ntBASIC2.21□□□□□ -2.06
DEPDC4Q8N2C3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 Y_RNA.119-201ENST00000363301 96 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 RNA5SP133-201ENST00000363368 119 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-654P-201ENST00000364373 107 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-979P-201ENST00000383896 107 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 SNORA3.2-201ENST00000408221 125 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 HMGN2P19-201ENST00000425149 265 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 snoU13.23-201ENST00000458863 104 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 MIR4500-201ENST00000579472 76 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 MIR8066-201ENST00000617280 78 ntBASIC2.2□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-1276P-201ENST00000365372 104 ntBASIC2.19□□□□□ -2.06
DEPDC4Q8N2C3 RNY1P4-201ENST00000384595 115 ntBASIC2.19□□□□□ -2.06
DEPDC4Q8N2C3 SNORD78.1-201ENST00000390866 65 ntBASIC2.19□□□□□ -2.06
DEPDC4Q8N2C3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.19□□□□□ -2.06
DEPDC4Q8N2C3 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-633P-201ENST00000362612 103 ntBASIC2.18□□□□□ -2.06
DEPDC4Q8N2C3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.18□□□□□ -2.06
DEPDC4Q8N2C3 Y_RNA.609-201ENST00000410669 89 ntBASIC2.18□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-267P-201ENST00000516714 103 ntBASIC2.18□□□□□ -2.06
DEPDC4Q8N2C3 uc_338.6-201ENST00000613544 171 ntBASIC2.18□□□□□ -2.06
DEPDC4Q8N2C3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
DEPDC4Q8N2C3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
DEPDC4Q8N2C3 Y_RNA.73-201ENST00000362910 113 ntBASIC2.17□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-53P-201ENST00000365367 106 ntBASIC2.17□□□□□ -2.06
DEPDC4Q8N2C3 RNU7-171P-201ENST00000459581 62 ntBASIC2.17□□□□□ -2.06
DEPDC4Q8N2C3 AC025521.1-201ENST00000621624 286 ntBASIC2.17□□□□□ -2.06
DEPDC4Q8N2C3 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
DEPDC4Q8N2C3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-509P-201ENST00000363519 107 ntBASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 Y_RNA.426-201ENST00000384068 113 ntBASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 HMGN2P38-201ENST00000423806 265 ntBASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-1194P-201ENST00000516208 104 ntBASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 RNU6-850P-201ENST00000516934 103 ntBASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
DEPDC4Q8N2C3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
DEPDC4Q8N2C3 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
DEPDC4Q8N2C3 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
DEPDC4Q8N2C3 MIR934-201ENST00000401241 83 ntBASIC2.15□□□□□ -2.07
DEPDC4Q8N2C3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.15□□□□□ -2.07
DEPDC4Q8N2C3 Z98742.3-201ENST00000418637 326 ntBASIC2.15□□□□□ -2.07
DEPDC4Q8N2C3 RNA5SP320-201ENST00000516263 124 ntBASIC2.15□□□□□ -2.07
DEPDC4Q8N2C3 AC015712.3-201ENST00000559380 164 ntBASIC2.15□□□□□ -2.07
DEPDC4Q8N2C3 AC020891.4-201ENST00000605745 93 ntBASIC2.15□□□□□ -2.07
DEPDC4Q8N2C3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 AC016717.2-201ENST00000609089 5141 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 RNU4-58P-201ENST00000363192 141 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 RNU6-482P-201ENST00000391068 107 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 AL359511.1-201ENST00000402970 211 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 RNA5SP95-201ENST00000410319 137 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 RNA5SP425-201ENST00000410336 112 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 RPS27P16-201ENST00000425758 201 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 MIR4648-201ENST00000580107 72 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 MIR4491-201ENST00000581087 68 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 MIR1291-201ENST00000627649 87 ntBASIC2.14□□□□□ -2.07
DEPDC4Q8N2C3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 SNORD113.3-201ENST00000364630 78 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 RNU1-36P-201ENST00000365130 165 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 Y_RNA.588-201ENST00000391254 102 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 SNORD93-201ENST00000408813 74 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 RN7SKP88-201ENST00000516847 250 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 RNU6-902P-201ENST00000517212 91 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 AL512598.1-201ENST00000610158 273 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 7SK.8-201ENST00000612110 250 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 7SK.11-201ENST00000615477 250 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 7SK.13-201ENST00000622040 250 ntBASIC2.13□□□□□ -2.07
DEPDC4Q8N2C3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
DEPDC4Q8N2C3 MIR676-201ENST00000390702 67 ntBASIC2.12□□□□□ -2.07
DEPDC4Q8N2C3 RNA5SP489-201ENST00000410986 109 ntBASIC2.12□□□□□ -2.07
DEPDC4Q8N2C3 AL603825.1-201ENST00000438481 80 ntBASIC2.12□□□□□ -2.07
DEPDC4Q8N2C3 RNU6-638P-201ENST00000516582 104 ntBASIC2.12□□□□□ -2.07
DEPDC4Q8N2C3 MIR4666B-201ENST00000578142 81 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms