Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 JTBP1-201ENST00000441314 247 ntBASIC2.47□□□□□ -2.01
CCDC116Q8IYX3 AC125388.1-201ENST00000459631 156 ntBASIC2.47□□□□□ -2.01
CCDC116Q8IYX3 RNU6-237P-201ENST00000515985 71 ntBASIC2.47□□□□□ -2.01
CCDC116Q8IYX3 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
CCDC116Q8IYX3 MIR6840-201ENST00000611937 71 ntBASIC2.47□□□□□ -2.01
CCDC116Q8IYX3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CCDC116Q8IYX3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC116Q8IYX3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.46□□□□□ -2.01
CCDC116Q8IYX3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 RNU6-53P-201ENST00000365367 106 ntBASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 SNORD23.1-201ENST00000408212 104 ntBASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 SNORD63B-201ENST00000411005 70 ntBASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 RN7SL274P-201ENST00000492268 272 ntBASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 RNU6-687P-201ENST00000516443 89 ntBASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 SNORA25.16-201ENST00000516741 121 ntBASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 MIR4491-201ENST00000581087 68 ntBASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 MIR3162-201ENST00000581818 82 ntBASIC2.46□□□□□ -2.02
CCDC116Q8IYX3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 RNU4-58P-201ENST00000363192 141 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 RNU6-957P-201ENST00000363652 99 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 Y_RNA.340-201ENST00000365330 92 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 SNORD90-201ENST00000391145 111 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 snoU13.25-201ENST00000458945 104 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 SNORD109B-201ENST00000458961 67 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 SNORD109A-201ENST00000459128 67 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 RNU6-634P-201ENST00000459134 106 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 RPL30P7-201ENST00000479312 323 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 RNU6-303P-201ENST00000517091 106 ntBASIC2.45□□□□□ -2.02
CCDC116Q8IYX3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CCDC116Q8IYX3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CCDC116Q8IYX3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC116Q8IYX3 RNU6-439P-201ENST00000384188 106 ntBASIC2.44□□□□□ -2.02
CCDC116Q8IYX3 MIR518E-201ENST00000385252 88 ntBASIC2.44□□□□□ -2.02
CCDC116Q8IYX3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC116Q8IYX3 GHRLOS.1-201ENST00000610995 70 ntBASIC2.44□□□□□ -2.02
CCDC116Q8IYX3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC116Q8IYX3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC116Q8IYX3 RNU6-859P-201ENST00000362728 107 ntBASIC2.43□□□□□ -2.02
CCDC116Q8IYX3 MIR1261-201ENST00000408659 82 ntBASIC2.43□□□□□ -2.02
CCDC116Q8IYX3 RNU6-250P-201ENST00000516958 103 ntBASIC2.43□□□□□ -2.02
CCDC116Q8IYX3 MIR664A-201ENST00000626086 82 ntBASIC2.43□□□□□ -2.02
CCDC116Q8IYX3 MIR6516-201ENST00000630554 81 ntBASIC2.43□□□□□ -2.02
CCDC116Q8IYX3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC116Q8IYX3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 RNU5F-1-201ENST00000362507 117 ntBASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 Y_RNA.588-201ENST00000391254 102 ntBASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 SNORD93-201ENST00000408813 74 ntBASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 AC074348.1-201ENST00000426503 132 ntBASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 RNU6-1194P-201ENST00000516208 104 ntBASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 RNU6-947P-201ENST00000516264 106 ntBASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 RNA5SP282-201ENST00000516355 108 ntBASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 U4.3-201ENST00000621047 82 ntBASIC2.42□□□□□ -2.02
CCDC116Q8IYX3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC116Q8IYX3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC116Q8IYX3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC116Q8IYX3 AL596028.1-201ENST00000326971 197 ntBASIC2.41□□□□□ -2.02
CCDC116Q8IYX3 MIR377-201ENST00000362145 69 ntBASIC2.41□□□□□ -2.02
CCDC116Q8IYX3 RNU6-587P-201ENST00000391282 106 ntBASIC2.41□□□□□ -2.02
CCDC116Q8IYX3 RNU2-19P-201ENST00000517288 84 ntBASIC2.41□□□□□ -2.02
CCDC116Q8IYX3 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
CCDC116Q8IYX3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC116Q8IYX3 Y_RNA.12-201ENST00000362393 112 ntBASIC2.4□□□□□ -2.03
CCDC116Q8IYX3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP356-201ENST00000515972 94 ntBASIC2.4□□□□□ -2.03
CCDC116Q8IYX3 MIR4319-201ENST00000577285 85 ntBASIC2.4□□□□□ -2.03
CCDC116Q8IYX3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CCDC116Q8IYX3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 RNU6-403P-201ENST00000363163 104 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 RNU6-649P-201ENST00000384463 107 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 U8.13-201ENST00000390842 128 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 MIR1265-201ENST00000408444 86 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 SNORD100-201ENST00000408573 76 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 MIR1185-1-201ENST00000408598 86 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 Y_RNA.596-201ENST00000410462 109 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 AC108938.1-201ENST00000451204 136 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 AP003716.2-201ENST00000528260 108 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 AC015688.6-201ENST00000577737 104 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 YWHAEP2-201ENST00000580066 112 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 YWHAEP3-201ENST00000582767 121 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
CCDC116Q8IYX3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP276-201ENST00000362580 94 ntBASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 RNU6-654P-201ENST00000364373 107 ntBASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 SNORA67.4-201ENST00000384688 142 ntBASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP95-201ENST00000410319 137 ntBASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 RNU7-195P-201ENST00000458793 62 ntBASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 TRAJ51-201ENST00000504127 63 ntBASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 RNU11-2P-201ENST00000516898 142 ntBASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC116Q8IYX3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 AC062016.1-201ENST00000355719 319 ntBASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 MIR103A2-201ENST00000362154 78 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms