Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 snoU13.13-201ENST00000458842 104 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.55□□□□□ -2.66
USP54Q70EL1 AC007012.1-201ENST00000567192 175 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 AC006362.1-201ENST00000567392 174 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.55□□□□□ -2.66
USP54Q70EL1 MIR3129-201ENST00000581095 76 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 MIR548AG2-201ENST00000581228 64 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 AL008718.3-201ENST00000610217 321 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 U6.92-201ENST00000636464 89 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 MIR382-201ENST00000637119 76 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 SNORD63-201ENST00000384262 68 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 RNU6-524P-201ENST00000384270 107 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 RNU2-66P-201ENST00000410650 161 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 MTND1P34-201ENST00000438556 671 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 RNU7-48P-201ENST00000458875 63 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 MTND3P3-201ENST00000505004 126 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.55□□□□□ -2.66
USP54Q70EL1 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.56□□□□□ -2.66
USP54Q70EL1 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.56□□□□□ -2.66
USP54Q70EL1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.56□□□□□ -2.66
USP54Q70EL1 MIR2113-201ENST00000459007 91 ntBASIC-1.56□□□□□ -2.66
USP54Q70EL1 RNU7-106P-201ENST00000459514 67 ntBASIC-1.56□□□□□ -2.66
USP54Q70EL1 MRPS35P2-201ENST00000508242 191 ntBASIC-1.56□□□□□ -2.66
USP54Q70EL1 RNU7-137P-201ENST00000516788 62 ntBASIC-1.56□□□□□ -2.66
USP54Q70EL1 RNU7-4P-201ENST00000516961 62 ntBASIC-1.56□□□□□ -2.66
USP54Q70EL1 MIR6129-201ENST00000616087 109 ntBASIC-1.56□□□□□ -2.66
USP54Q70EL1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.57□□□□□ -2.66
USP54Q70EL1 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.57□□□□□ -2.66
USP54Q70EL1 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.57□□□□□ -2.66
USP54Q70EL1 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.57□□□□□ -2.66
USP54Q70EL1 MIR8068-201ENST00000618032 68 ntBASIC-1.57□□□□□ -2.66
USP54Q70EL1 snoR1.1-201ENST00000628177 80 ntBASIC-1.57□□□□□ -2.66
USP54Q70EL1 SNORD115-25-201ENST00000362619 82 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 MIR216B-201ENST00000390186 82 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 MIR548K-201ENST00000408406 116 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 AC107399.1-201ENST00000451226 265 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 MIR628-201ENST00000385229 95 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 SERF1AP1-201ENST00000514575 187 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 MIR5197-201ENST00000583721 112 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.58□□□□□ -2.66
USP54Q70EL1 SNORD114-4-201ENST00000363962 75 ntBASIC-1.59□□□□□ -2.66
USP54Q70EL1 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.59□□□□□ -2.66
USP54Q70EL1 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.59□□□□□ -2.66
USP54Q70EL1 RNU6-507P-201ENST00000516045 100 ntBASIC-1.59□□□□□ -2.66
USP54Q70EL1 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.59□□□□□ -2.66
USP54Q70EL1 AL442663.2-201ENST00000554385 511 ntBASIC-1.59□□□□□ -2.66
USP54Q70EL1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.59□□□□□ -2.66
USP54Q70EL1 VN1R91P-201ENST00000594377 169 ntBASIC-1.59□□□□□ -2.66
USP54Q70EL1 MIR367-201ENST00000362299 68 ntBASIC-1.6□□□□□ -2.67
USP54Q70EL1 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.6□□□□□ -2.67
USP54Q70EL1 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.6□□□□□ -2.67
USP54Q70EL1 RNY4P36-201ENST00000391116 96 ntBASIC-1.6□□□□□ -2.67
USP54Q70EL1 DEFB108C-201ENST00000400154 252 ntBASIC-1.6□□□□□ -2.67
USP54Q70EL1 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.6□□□□□ -2.67
USP54Q70EL1 RNU6-314P-201ENST00000516574 104 ntBASIC-1.6□□□□□ -2.67
USP54Q70EL1 snoU83B.1-201ENST00000517136 88 ntBASIC-1.6□□□□□ -2.67
USP54Q70EL1 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 U8.20-201ENST00000459445 131 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 RNU6-120P-201ENST00000516077 103 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 AL359881.1-201ENST00000602916 267 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 AC145423.2-201ENST00000610631 239 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 RNY3P11-201ENST00000364153 102 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 MIR147A-201ENST00000385079 72 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 AC097639.2-201ENST00000603159 172 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 Z99129.1-201ENST00000612510 255 ntBASIC-1.61□□□□□ -2.67
USP54Q70EL1 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.62□□□□□ -2.67
USP54Q70EL1 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.62□□□□□ -2.67
USP54Q70EL1 MIR526A2-201ENST00000390198 65 ntBASIC-1.62□□□□□ -2.67
USP54Q70EL1 RNU6-780P-201ENST00000391030 104 ntBASIC-1.62□□□□□ -2.67
USP54Q70EL1 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.62□□□□□ -2.67
USP54Q70EL1 C8orf59P2-201ENST00000603441 271 ntBASIC-1.62□□□□□ -2.67
USP54Q70EL1 AC093424.1-201ENST00000604999 338 ntBASIC-1.62□□□□□ -2.67
USP54Q70EL1 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.63□□□□□ -2.67
USP54Q70EL1 RNU6-905P-201ENST00000384434 107 ntBASIC-1.63□□□□□ -2.67
USP54Q70EL1 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.63□□□□□ -2.67
USP54Q70EL1 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.63□□□□□ -2.67
USP54Q70EL1 MT-TT-201ENST00000387460 66 ntBASIC-1.63□□□□□ -2.67
USP54Q70EL1 RNU6-191P-201ENST00000516295 94 ntBASIC-1.63□□□□□ -2.67
USP54Q70EL1 MIR376A2-201ENST00000636782 80 ntBASIC-1.63□□□□□ -2.67
USP54Q70EL1 RNU6-170P-201ENST00000362832 104 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 RNU6-728P-201ENST00000365375 104 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms