Protein–RNA interactions for Protein: Q08ER8

ZNF543, Zinc finger protein 543, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543Q08ER8 Y_RNA.506-201ENST00000384494 102 ntBASIC0.92□□□□□ -2.26
ZNF543Q08ER8 SNORA40-201ENST00000388090 126 ntBASIC0.92□□□□□ -2.26
ZNF543Q08ER8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.92□□□□□ -2.26
ZNF543Q08ER8 RNU4-69P-201ENST00000410677 143 ntBASIC0.92□□□□□ -2.26
ZNF543Q08ER8 RNU4-83P-201ENST00000410863 133 ntBASIC0.92□□□□□ -2.26
ZNF543Q08ER8 RNY4P20-201ENST00000516678 93 ntBASIC0.92□□□□□ -2.26
ZNF543Q08ER8 MIR548AE2-201ENST00000583456 67 ntBASIC0.92□□□□□ -2.26
ZNF543Q08ER8 AL078603.1-201ENST00000603824 313 ntBASIC0.92□□□□□ -2.26
ZNF543Q08ER8 Y_RNA.568-201ENST00000384742 113 ntBASIC0.91□□□□□ -2.26
ZNF543Q08ER8 U8.15-201ENST00000390947 134 ntBASIC0.91□□□□□ -2.26
ZNF543Q08ER8 SNORD77B-201ENST00000391112 67 ntBASIC0.91□□□□□ -2.26
ZNF543Q08ER8 SNORD92-201ENST00000585078 85 ntBASIC0.91□□□□□ -2.26
ZNF543Q08ER8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.26
ZNF543Q08ER8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
ZNF543Q08ER8 RNU6-110P-201ENST00000384508 104 ntBASIC0.9□□□□□ -2.27
ZNF543Q08ER8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
ZNF543Q08ER8 AL158147.1-201ENST00000443970 75 ntBASIC0.9□□□□□ -2.27
ZNF543Q08ER8 RNU7-102P-201ENST00000458948 62 ntBASIC0.9□□□□□ -2.27
ZNF543Q08ER8 RN7SKP19-201ENST00000516016 252 ntBASIC0.9□□□□□ -2.27
ZNF543Q08ER8 RNU6-346P-201ENST00000516288 111 ntBASIC0.9□□□□□ -2.27
ZNF543Q08ER8 RNA5SP220-201ENST00000516298 104 ntBASIC0.9□□□□□ -2.27
ZNF543Q08ER8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.9□□□□□ -2.27
ZNF543Q08ER8 AC011195.1-201ENST00000578177 177 ntBASIC0.9□□□□□ -2.27
ZNF543Q08ER8 MIR573-201ENST00000384964 99 ntBASIC0.89□□□□□ -2.27
ZNF543Q08ER8 MIR759-201ENST00000390224 91 ntBASIC0.89□□□□□ -2.27
ZNF543Q08ER8 AC022709.1-201ENST00000615967 87 ntBASIC0.89□□□□□ -2.27
ZNF543Q08ER8 AL589743.1-201ENST00000551932 2712 ntBASIC0.88□□□□□ -2.27
ZNF543Q08ER8 RNU6-403P-201ENST00000363163 104 ntBASIC0.88□□□□□ -2.27
ZNF543Q08ER8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.88□□□□□ -2.27
ZNF543Q08ER8 RNA5SP136-201ENST00000410906 107 ntBASIC0.88□□□□□ -2.27
ZNF543Q08ER8 MTND4LP9-201ENST00000427694 174 ntBASIC0.88□□□□□ -2.27
ZNF543Q08ER8 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
ZNF543Q08ER8 RNA5SP272-201ENST00000516095 111 ntBASIC0.88□□□□□ -2.27
ZNF543Q08ER8 Y_RNA.703-201ENST00000516846 111 ntBASIC0.88□□□□□ -2.27
ZNF543Q08ER8 SNORD114-10-201ENST00000363409 72 ntBASIC0.87□□□□□ -2.27
ZNF543Q08ER8 MIR539-201ENST00000365690 78 ntBASIC0.87□□□□□ -2.27
ZNF543Q08ER8 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
ZNF543Q08ER8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
ZNF543Q08ER8 Y_RNA.280-201ENST00000364765 112 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 RNU4-45P-201ENST00000365469 141 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 RNU6-746P-201ENST00000384112 109 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 RNU6-42P-201ENST00000384165 107 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 MIR605-201ENST00000385078 83 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.86□□□□□ -2.27
ZNF543Q08ER8 AC090897.1-201ENST00000580909 226 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 MIR4491-201ENST00000581087 68 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
ZNF543Q08ER8 Y_RNA.213-201ENST00000364178 111 ntBASIC0.85□□□□□ -2.27
ZNF543Q08ER8 Y_RNA.294-201ENST00000364916 102 ntBASIC0.85□□□□□ -2.27
ZNF543Q08ER8 snoU13.18-201ENST00000459483 104 ntBASIC0.85□□□□□ -2.27
ZNF543Q08ER8 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
ZNF543Q08ER8 RNU6-765P-201ENST00000516916 99 ntBASIC0.85□□□□□ -2.27
ZNF543Q08ER8 MIR6734-201ENST00000621166 68 ntBASIC0.85□□□□□ -2.27
ZNF543Q08ER8 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
ZNF543Q08ER8 SNORA72.6-201ENST00000384520 129 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 Y_RNA.588-201ENST00000391254 102 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 MIR1263-201ENST00000408324 86 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 RNU6-257P-201ENST00000410238 98 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 SNORD67.1-201ENST00000516618 108 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 RNU7-137P-201ENST00000516788 62 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 RNU6-448P-201ENST00000517052 107 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 AP003327.1-201ENST00000529684 127 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 AC133485.1-201ENST00000567176 124 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 MIR6082-201ENST00000613604 109 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 MIR8066-201ENST00000617280 78 ntBASIC0.84□□□□□ -2.27
ZNF543Q08ER8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 Y_RNA.42-201ENST00000362660 108 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 SNORD50.2-201ENST00000365465 70 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 Y_RNA.617-201ENST00000410920 90 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 AC022523.2-201ENST00000561045 150 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 MIR3163-201ENST00000581592 73 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 MIR3133-201ENST00000583157 78 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 AC008608.1-201ENST00000603910 127 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
ZNF543Q08ER8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
ZNF543Q08ER8 Y_RNA.198-201ENST00000364013 98 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 RNA5SP117-201ENST00000365294 118 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 RNU6-1104P-201ENST00000384723 104 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 MIR613-201ENST00000385248 95 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 SNORD100-201ENST00000408573 76 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 COX6CP6-201ENST00000490840 228 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 IGKV1-22-201ENST00000524313 326 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 DEFB131E-201ENST00000532329 154 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 MIR3612-201ENST00000579753 87 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
ZNF543Q08ER8 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
ZNF543Q08ER8 MIR489-201ENST00000384923 84 ntBASIC0.81□□□□□ -2.28
ZNF543Q08ER8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.81□□□□□ -2.28
ZNF543Q08ER8 AC096949.1-201ENST00000412047 152 ntBASIC0.81□□□□□ -2.28
ZNF543Q08ER8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.81□□□□□ -2.28
ZNF543Q08ER8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.81□□□□□ -2.28
ZNF543Q08ER8 RNU4-58P-201ENST00000363192 141 ntBASIC0.8□□□□□ -2.28
ZNF543Q08ER8 Y_RNA.118-201ENST00000363300 101 ntBASIC0.8□□□□□ -2.28
ZNF543Q08ER8 RNU6-1211P-201ENST00000459179 105 ntBASIC0.8□□□□□ -2.28
ZNF543Q08ER8 AC002350.1-201ENST00000490759 375 ntBASIC0.8□□□□□ -2.28
ZNF543Q08ER8 RNU6-1061P-201ENST00000516530 99 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms