Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNA5SP330-201ENST00000517096 96 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 RNU7-35P-201ENST00000517174 62 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
SCN1BQ07699 MIR4305-201ENST00000583252 102 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.05□□□□□ -2.4
SCN1BQ07699 AC244669.1-204ENST00000621564 178 ntBASIC0.05□□□□□ -2.4
SCN1BQ07699 Y_RNA.52-201ENST00000362760 96 ntBASIC0.04□□□□□ -2.4
SCN1BQ07699 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
SCN1BQ07699 RNU4-58P-201ENST00000363192 141 ntBASIC0.04□□□□□ -2.4
SCN1BQ07699 Y_RNA.521-201ENST00000384560 114 ntBASIC0.04□□□□□ -2.4
SCN1BQ07699 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
SCN1BQ07699 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
SCN1BQ07699 U6.109-201ENST00000636749 87 ntBASIC0.04□□□□□ -2.4
SCN1BQ07699 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
SCN1BQ07699 SNORA42.1-201ENST00000363515 137 ntBASIC0.03□□□□□ -2.4
SCN1BQ07699 SNORA63.5-201ENST00000363548 123 ntBASIC0.03□□□□□ -2.4
SCN1BQ07699 Y_RNA.412-201ENST00000384001 104 ntBASIC0.03□□□□□ -2.4
SCN1BQ07699 RNU6-738P-201ENST00000384531 106 ntBASIC0.03□□□□□ -2.4
SCN1BQ07699 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
SCN1BQ07699 PCNPP3-201ENST00000393579 471 ntBASIC0.03□□□□□ -2.4
SCN1BQ07699 RNA5SP33-201ENST00000516687 98 ntBASIC0.03□□□□□ -2.4
SCN1BQ07699 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
SCN1BQ07699 RNA5SP325-201ENST00000363756 130 ntBASIC0.02□□□□□ -2.41
SCN1BQ07699 RNA5SP245-201ENST00000364239 121 ntBASIC0.02□□□□□ -2.41
SCN1BQ07699 MIRLET7F2-201ENST00000385277 83 ntBASIC0.02□□□□□ -2.41
SCN1BQ07699 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
SCN1BQ07699 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.02□□□□□ -2.41
SCN1BQ07699 U6.106-201ENST00000636360 105 ntBASIC0.02□□□□□ -2.41
SCN1BQ07699 RNU6-1126P-201ENST00000384002 107 ntBASIC0.01□□□□□ -2.41
SCN1BQ07699 MIR760-201ENST00000390220 80 ntBASIC0.01□□□□□ -2.41
SCN1BQ07699 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.01□□□□□ -2.41
SCN1BQ07699 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
SCN1BQ07699 MIR101-2-201ENST00000362195 79 ntBASIC0□□□□□ -2.41
SCN1BQ07699 Y_RNA.120-201ENST00000363304 110 ntBASIC0□□□□□ -2.41
SCN1BQ07699 RNU6-690P-201ENST00000365242 106 ntBASIC0□□□□□ -2.41
SCN1BQ07699 Y_RNA.540-201ENST00000384638 111 ntBASIC0□□□□□ -2.41
SCN1BQ07699 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0□□□□□ -2.41
SCN1BQ07699 AL109933.3-201ENST00000619095 188 ntBASIC0□□□□□ -2.41
SCN1BQ07699 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.01□□□□□ -2.41
SCN1BQ07699 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
SCN1BQ07699 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.01□□□□□ -2.41
SCN1BQ07699 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.01□□□□□ -2.41
SCN1BQ07699 RNA5SP236-201ENST00000516169 116 ntBASIC-0.01□□□□□ -2.41
SCN1BQ07699 MIR4752-201ENST00000579672 72 ntBASIC-0.01□□□□□ -2.41
SCN1BQ07699 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.01□□□□□ -2.41
SCN1BQ07699 SNORD115-2-201ENST00000362842 82 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 SNORD115-20-201ENST00000365099 82 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 SNORD58.1-201ENST00000391313 66 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 SNORD67.1-201ENST00000516618 108 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 RNU7-137P-201ENST00000516788 62 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 AC138749.4-201ENST00000563970 127 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 MIR548AE2-201ENST00000583456 67 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 AL360085.1-201ENST00000604713 532 ntBASIC-0.02□□□□□ -2.41
SCN1BQ07699 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.03□□□□□ -2.41
SCN1BQ07699 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
SCN1BQ07699 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.03□□□□□ -2.41
SCN1BQ07699 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.03□□□□□ -2.41
SCN1BQ07699 RNU6-768P-201ENST00000384683 107 ntBASIC-0.03□□□□□ -2.41
SCN1BQ07699 RNU6-127P-201ENST00000390897 107 ntBASIC-0.03□□□□□ -2.41
SCN1BQ07699 MTCYBP9-201ENST00000431021 303 ntBASIC-0.03□□□□□ -2.41
SCN1BQ07699 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.03□□□□□ -2.41
SCN1BQ07699 SNORD115-24-201ENST00000363528 82 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 RNA5SP457-201ENST00000363657 124 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 RNU6-302P-201ENST00000365249 107 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 MIR1302-3-201ENST00000408128 138 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 RNU4-71P-201ENST00000516258 113 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 MIR3128-201ENST00000581957 66 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 AL359881.1-201ENST00000602916 267 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 AC098479.1-201ENST00000609225 154 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 MIR6718-201ENST00000616153 80 ntBASIC-0.04□□□□□ -2.42
SCN1BQ07699 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
SCN1BQ07699 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.05□□□□□ -2.42
SCN1BQ07699 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.05□□□□□ -2.42
SCN1BQ07699 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.05□□□□□ -2.42
SCN1BQ07699 RNA5SP128-201ENST00000365305 116 ntBASIC-0.05□□□□□ -2.42
SCN1BQ07699 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.05□□□□□ -2.42
SCN1BQ07699 MIR643-201ENST00000385267 97 ntBASIC-0.05□□□□□ -2.42
SCN1BQ07699 AC105081.1-201ENST00000617727 106 ntBASIC-0.05□□□□□ -2.42
SCN1BQ07699 RNU6-818P-201ENST00000364837 108 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 RNU6-702P-201ENST00000364982 107 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 RNU6-848P-201ENST00000515948 107 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 RNU6-617P-201ENST00000516147 107 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 RNU6-473P-201ENST00000516164 107 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 RNU2-35P-201ENST00000516446 142 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 MIR5190-201ENST00000581537 80 ntBASIC-0.06□□□□□ -2.42
SCN1BQ07699 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 RNA5SP257-201ENST00000363023 116 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 SNORA2A-201ENST00000383885 135 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 MIR568-201ENST00000385036 95 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 MIR610-201ENST00000385139 96 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 RNU6-918P-201ENST00000391219 106 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 MIR548L-201ENST00000408303 86 ntBASIC-0.07□□□□□ -2.42
SCN1BQ07699 RNU6-240P-201ENST00000516098 97 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 231.7 ms