Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 MIR507-201ENST00000385234 94 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 AL160004.2-201ENST00000432935 350 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RPS3AP52-201ENST00000435639 297 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU7-80P-201ENST00000459562 61 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-850P-201ENST00000516934 103 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 AL365205.2-201ENST00000594586 68 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 AL162413.1-201ENST00000603198 110 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-832P-201ENST00000363319 107 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR513B-201ENST00000385136 84 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MT-TT-201ENST00000387460 66 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 SNORA26.4-201ENST00000391188 123 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR548H1-201ENST00000408610 102 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-893P-201ENST00000458841 100 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AC108019.1-201ENST00000512540 175 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNA5SP236-201ENST00000516169 116 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-412P-201ENST00000516434 106 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-719P-201ENST00000516671 104 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR5692C2-201ENST00000577959 77 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AL022161.1-201ENST00000604390 213 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNA5SP405-201ENST00000363059 114 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-653P-201ENST00000363074 106 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-652P-201ENST00000365488 107 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR519A2-201ENST00000384990 87 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 SNORD75.2-201ENST00000408784 58 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 PMCHL1-202ENST00000423102 261 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-277P-201ENST00000516272 106 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-365P-201ENST00000517113 106 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AC060788.1-201ENST00000521318 469 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 PART1_1.1-201ENST00000611761 217 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AC073114.1-201ENST00000612027 490 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR376A1-201ENST00000616574 68 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AC087741.2-201ENST00000619415 172 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AC132825.6-201ENST00000638861 357 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-931P-201ENST00000363850 107 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-746P-201ENST00000384112 109 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU6-214P-201ENST00000384130 107 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR519E-201ENST00000385075 84 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR889-201ENST00000401280 79 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNA5SP144-201ENST00000410846 116 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 SNORD2.1-201ENST00000458762 69 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 CCDC34P1-201ENST00000507441 517 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 SNORD77.4-201ENST00000516158 81 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNA5SP147-201ENST00000516493 109 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AC138907.4-201ENST00000570107 226 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR4460-201ENST00000577862 86 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 MIR4659A-201ENST00000580269 81 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AC009779.6-201ENST00000603972 165 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 AC021613.1-201ENST00000623880 111 ntBASIC-0.31□□□□□ -2.46
COL7A1Q02388 RNU4-68P-201ENST00000364314 141 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-309P-201ENST00000364573 106 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNY1P6-201ENST00000384193 109 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNY3P4-201ENST00000384428 101 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-297P-201ENST00000384636 107 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 AL353813.1-201ENST00000440700 253 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 AC021146.6-201ENST00000514659 117 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-479P-201ENST00000516348 105 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU2-35P-201ENST00000516446 142 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 RNU6-699P-201ENST00000517081 110 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL7A1Q02388 AC113139.1-201ENST00000605049 239 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 SNORD113-5-201ENST00000607261 78 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 MIR376A2-201ENST00000636782 80 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 FGF7P2-201ENST00000332473 296 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.32□□□□□ -2.46
COL7A1Q02388 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms