Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.8□□□□□ -2.54
HSPG2P98160 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.8□□□□□ -2.54
HSPG2P98160 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNU6-181P-201ENST00000363225 107 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNU6-842P-201ENST00000384269 107 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 SNORD78.2-201ENST00000391076 69 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNU7-70P-201ENST00000516941 66 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNU6-445P-201ENST00000516949 107 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNU6-762P-201ENST00000517107 102 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 AL365205.2-201ENST00000594586 68 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 MIR6888-201ENST00000621977 67 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 SNORD116.1-201ENST00000365628 92 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 SNORD38.2-201ENST00000384470 69 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 RNA5SP144-201ENST00000410846 116 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 AL009048.1-201ENST00000450437 298 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 MIR3129-201ENST00000581095 76 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 AC097639.2-201ENST00000603159 172 ntBASIC-0.8□□□□□ -2.54
HSPG2P98160 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU4-50P-201ENST00000364361 141 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 SNORA72.4-201ENST00000384174 132 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 MIR2113-201ENST00000459007 91 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 FGF7P4-201ENST00000509595 295 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.81□□□□□ -2.54
HSPG2P98160 AC092747.3-201ENST00000603769 301 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU6-626P-201ENST00000363354 107 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU4-68P-201ENST00000364314 141 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU6-850P-201ENST00000516934 103 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 U7.5-201ENST00000517224 61 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU6-664P-201ENST00000362381 107 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU6-801P-201ENST00000364087 105 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU6-472P-201ENST00000384299 107 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 RNU7-24P-201ENST00000458867 62 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 SNORD42B-201ENST00000458893 67 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 AL021707.8-201ENST00000609428 183 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.81□□□□□ -2.54
HSPG2P98160 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 MIR516A2-201ENST00000384888 90 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 MIR516A1-201ENST00000385033 90 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 MTATP6P19-201ENST00000413797 659 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.82□□□□□ -2.54
HSPG2P98160 AC024909.2-201ENST00000553035 286 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 AC084781.2-201ENST00000615568 161 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 MIR367-201ENST00000362299 68 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 RNU6-38P-201ENST00000384085 107 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 MTND4P28-201ENST00000426217 387 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 MIR3942-201ENST00000585264 109 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 AC006006.1-201ENST00000603082 144 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 RNU6-230P-201ENST00000362457 104 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 RNU6-841P-201ENST00000383872 107 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 AC024067.1-201ENST00000426199 223 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 AC011476.5-201ENST00000615594 130 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 RNU6-102P-201ENST00000384485 104 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 RNU6-195P-201ENST00000411352 109 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 MTND1P2-201ENST00000430604 821 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.82□□□□□ -2.54
HSPG2P98160 RNU6-276P-201ENST00000516114 96 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 MIR4696-201ENST00000581431 70 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.82□□□□□ -2.54
HSPG2P98160 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 MTND3P16-201ENST00000452205 344 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 RNU7-106P-201ENST00000459514 67 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 AC083798.1-201ENST00000472671 131 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 RNU2-31P-201ENST00000516954 155 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 MIR5692C2-201ENST00000577959 77 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 AC133104.2-201ENST00000615272 193 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 RNU6-500P-201ENST00000362349 107 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 RNU6-258P-201ENST00000390884 101 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 SNORD5.1-201ENST00000458800 75 ntBASIC-0.83□□□□□ -2.54
HSPG2P98160 RNU6-888P-201ENST00000363010 101 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 RNU6-636P-201ENST00000384598 107 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 AC083904.1-201ENST00000487828 231 ntBASIC-0.84□□□□□ -2.54
HSPG2P98160 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.84□□□□□ -2.54
HSPG2P98160 RNA5SP153-201ENST00000516498 76 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms