Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 RNY1P10-201ENST00000363268 113 ntBASIC1.78□□□□□ -2.12
ITGA1P56199 Y_RNA.226-201ENST00000364337 114 ntBASIC1.78□□□□□ -2.12
ITGA1P56199 AC244023.1-201ENST00000426884 112 ntBASIC1.78□□□□□ -2.12
ITGA1P56199 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.78□□□□□ -2.12
ITGA1P56199 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
ITGA1P56199 MIR4781-201ENST00000585250 76 ntBASIC1.78□□□□□ -2.12
ITGA1P56199 AC242498.1-201ENST00000604134 111 ntBASIC1.78□□□□□ -2.12
ITGA1P56199 Y_RNA.98-201ENST00000363109 102 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 Y_RNA.190-201ENST00000363964 101 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 RNU6-1163P-201ENST00000364516 107 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 U8.15-201ENST00000390947 134 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 MIR1302-7-201ENST00000408841 72 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 AC027119.1-201ENST00000440877 241 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 snoU13.31-201ENST00000607291 104 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 SEPT14P17-201ENST00000617978 177 ntBASIC1.77□□□□□ -2.13
ITGA1P56199 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
ITGA1P56199 MIR378A-201ENST00000362177 66 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 SNORA25.3-201ENST00000363205 127 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 SNORD116-10-201ENST00000363791 102 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 RNU6-396P-201ENST00000365369 105 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 RNU6-1152P-201ENST00000384576 107 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 SNORA17.3-201ENST00000391159 129 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 MIR548G-201ENST00000408442 89 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 snoU13.2-201ENST00000459201 104 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 RNU6-86P-201ENST00000606534 107 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 AC103810.8-201ENST00000607347 118 ntBASIC1.76□□□□□ -2.13
ITGA1P56199 SNORD58A-201ENST00000383875 65 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 RNU6-949P-201ENST00000384040 107 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 SNORD38.2-201ENST00000384470 69 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 MIR588-201ENST00000384900 83 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 RNU6-592P-201ENST00000411333 103 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 RPL39P39-201ENST00000455840 151 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 RNU6-947P-201ENST00000516264 106 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 AC133485.1-201ENST00000567176 124 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
ITGA1P56199 RNU6-90P-201ENST00000606352 106 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 AC103810.7-201ENST00000607821 91 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 MIR8063-201ENST00000621930 81 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 AP001362.1-201ENST00000625165 124 ntBASIC1.75□□□□□ -2.13
ITGA1P56199 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ITGA1P56199 RNU6-1244P-201ENST00000363614 108 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 RNY1P1-201ENST00000364372 112 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 RNU6-573P-201ENST00000383938 106 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 MIR9-3-201ENST00000385084 90 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 SPINT5P-201ENST00000448174 155 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 snoU13.25-201ENST00000458945 104 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 AC005908.1-201ENST00000468701 347 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
ITGA1P56199 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ITGA1P56199 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 SNORD116-22-201ENST00000384430 92 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 Y_RNA.567-201ENST00000384736 106 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 MIR563-201ENST00000385080 79 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 MIR1287-201ENST00000408492 90 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.73□□□□□ -2.13
ITGA1P56199 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 MIR2115-201ENST00000516657 100 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 MIR4264-201ENST00000583520 66 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 AP000753.3-201ENST00000604083 169 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 IGLL4P-201ENST00000614590 133 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 MIR1245B-201ENST00000636115 69 ntBASIC1.73□□□□□ -2.13
ITGA1P56199 MIR302D-201ENST00000362275 68 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 MIR337-201ENST00000362281 93 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 RNU6-675P-201ENST00000384236 104 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 RNU6-402P-201ENST00000410678 103 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 AP003327.1-201ENST00000529684 127 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 MIR6740-201ENST00000618268 113 ntBASIC1.72□□□□□ -2.13
ITGA1P56199 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ITGA1P56199 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
ITGA1P56199 RNY1P2-201ENST00000364820 117 ntBASIC1.71□□□□□ -2.14
ITGA1P56199 MIR30A-201ENST00000385092 71 ntBASIC1.71□□□□□ -2.14
ITGA1P56199 MT-TN-201ENST00000387400 73 ntBASIC1.71□□□□□ -2.14
ITGA1P56199 AC022137.1-201ENST00000483735 151 ntBASIC1.71□□□□□ -2.14
ITGA1P56199 AL133373.1-201ENST00000497098 94 ntBASIC1.71□□□□□ -2.14
ITGA1P56199 MTND5P40-201ENST00000559945 246 ntBASIC1.71□□□□□ -2.14
ITGA1P56199 AC012676.2-201ENST00000619258 186 ntBASIC1.71□□□□□ -2.14
ITGA1P56199 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
ITGA1P56199 Y_RNA.173-201ENST00000363776 113 ntBASIC1.7□□□□□ -2.14
ITGA1P56199 RNU6-205P-201ENST00000390858 107 ntBASIC1.7□□□□□ -2.14
ITGA1P56199 RNU7-62P-201ENST00000458856 62 ntBASIC1.7□□□□□ -2.14
ITGA1P56199 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
ITGA1P56199 AC019176.1-201ENST00000518519 225 ntBASIC1.7□□□□□ -2.14
ITGA1P56199 AP003716.2-201ENST00000528260 108 ntBASIC1.7□□□□□ -2.14
ITGA1P56199 SNORA4-201ENST00000584302 138 ntBASIC1.7□□□□□ -2.14
ITGA1P56199 MIR7111-201ENST00000619751 72 ntBASIC1.7□□□□□ -2.14
ITGA1P56199 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ITGA1P56199 HSBP1P2-201ENST00000299671 229 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 Y_RNA.73-201ENST00000362910 113 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 Y_RNA.168-201ENST00000363740 102 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 RNU6-219P-201ENST00000364728 107 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 MIR1185-1-201ENST00000408598 86 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms