Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 VTRNA1-3-201ENST00000365645 89 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 RNU6-949P-201ENST00000384040 107 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 Y_RNA.588-201ENST00000391254 102 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 MIR1197-201ENST00000408818 88 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 RNA5SP222-201ENST00000411039 105 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 RNU6-893P-201ENST00000458841 100 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 Y_RNA.686-201ENST00000516548 134 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 AC011603.4-201ENST00000611325 277 ntBASIC0.51□□□□□ -2.33
HMGCS2P54868 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
HMGCS2P54868 MIR18A-201ENST00000362310 71 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 Y_RNA.42-201ENST00000362660 108 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-690P-201ENST00000365242 106 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-1130P-201ENST00000365434 107 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-364P-201ENST00000384387 107 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 SNORD100-201ENST00000408573 76 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 SNORD93-201ENST00000408813 74 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-447P-201ENST00000410293 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-1118P-201ENST00000410382 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-1076P-201ENST00000410397 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-355P-201ENST00000410427 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-791P-201ENST00000410467 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-705P-201ENST00000410601 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-1100P-201ENST00000410691 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-860P-201ENST00000410860 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-1086P-201ENST00000410930 100 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-1217P-201ENST00000411276 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-785P-201ENST00000411324 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU7-197P-201ENST00000458836 62 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU6-240P-201ENST00000516098 97 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 U6.90-201ENST00000614007 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 FTX_2.1-201ENST00000618816 94 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 U6.70-201ENST00000620287 104 ntBASIC0.5□□□□□ -2.33
HMGCS2P54868 Y_RNA.580-201ENST00000391004 95 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 SNORD37.2-201ENST00000391075 66 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 Y_RNA.584-201ENST00000391090 114 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 RNU4-83P-201ENST00000410863 133 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 AC002350.1-201ENST00000490759 375 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 RNU7-35P-201ENST00000517174 62 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 AC112693.2-201ENST00000556538 232 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 MIR4305-201ENST00000583252 102 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 AC090425.1-201ENST00000610007 140 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
HMGCS2P54868 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
HMGCS2P54868 RNU4-11P-201ENST00000365287 132 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 Y_RNA.531-201ENST00000384589 121 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 AL603914.1-201ENST00000401964 204 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 MTATP6P21-201ENST00000440681 189 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 RNU7-113P-201ENST00000459273 62 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 MIR1270-201ENST00000459320 83 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 RNU7-79P-201ENST00000516082 62 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 RNU6-182P-201ENST00000516970 105 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 MIR4491-201ENST00000581087 68 ntBASIC0.48□□□□□ -2.33
HMGCS2P54868 Y_RNA.13-201ENST00000362403 112 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 Y_RNA.150-201ENST00000363562 102 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 RNU6-804P-201ENST00000384286 107 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 RNU6-886P-201ENST00000384319 105 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 Y_RNA.617-201ENST00000410920 90 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 AL022718.1-201ENST00000412004 84 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 RNA5SP33-201ENST00000516687 98 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 RNU6-794P-201ENST00000517261 64 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.47□□□□□ -2.33
HMGCS2P54868 MIR6082-201ENST00000613604 109 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 Y_RNA.778-201ENST00000620203 90 ntBASIC0.47□□□□□ -2.33
HMGCS2P54868 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.47□□□□□ -2.33
HMGCS2P54868 RNU6-151P-201ENST00000364158 107 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 SNORA36.2-201ENST00000384004 127 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 RNU7-123P-201ENST00000515911 60 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 Y_RNA.690-201ENST00000516603 95 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 RNU6-448P-201ENST00000517052 107 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 AC133485.4-201ENST00000561835 220 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 AC138907.4-201ENST00000570107 226 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 MIR548AE2-201ENST00000583456 67 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 AC108081.1-201ENST00000604358 221 ntBASIC0.46□□□□□ -2.34
HMGCS2P54868 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.46□□□□□ -2.34
HMGCS2P54868 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 Y_RNA.366-201ENST00000365540 102 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 RNU6-449P-201ENST00000383914 107 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 SNORA32-201ENST00000384072 121 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 RNU6-460P-201ENST00000391158 108 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 RNU7-164P-201ENST00000459221 62 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 MIR3144-201ENST00000579460 79 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 AL359881.1-201ENST00000602916 267 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 AC021443.1-201ENST00000604478 211 ntBASIC0.45□□□□□ -2.34
HMGCS2P54868 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HMGCS2P54868 RNU6-403P-201ENST00000363163 104 ntBASIC0.44□□□□□ -2.34
HMGCS2P54868 SNORD18B-201ENST00000365659 72 ntBASIC0.44□□□□□ -2.34
HMGCS2P54868 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
HMGCS2P54868 SNORD116-18-201ENST00000383961 92 ntBASIC0.44□□□□□ -2.34
HMGCS2P54868 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
HMGCS2P54868 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
HMGCS2P54868 MIR2909-201ENST00000617113 69 ntBASIC0.44□□□□□ -2.34
HMGCS2P54868 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HMGCS2P54868 Y_RNA.85-201ENST00000363014 111 ntBASIC0.43□□□□□ -2.34
HMGCS2P54868 Y_RNA.298-201ENST00000364960 107 ntBASIC0.43□□□□□ -2.34
HMGCS2P54868 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms