Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 Y_RNA.588-201ENST00000391254 102 ntBASIC0.71□□□□□ -2.3
NEK3P51956 RN7SKP12-201ENST00000516275 143 ntBASIC0.71□□□□□ -2.3
NEK3P51956 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.71□□□□□ -2.3
NEK3P51956 AC098479.1-201ENST00000609225 154 ntBASIC0.71□□□□□ -2.3
NEK3P51956 Y_RNA.470-201ENST00000384307 117 ntBASIC0.7□□□□□ -2.3
NEK3P51956 RNU6-1194P-201ENST00000516208 104 ntBASIC0.7□□□□□ -2.3
NEK3P51956 MIR4491-201ENST00000581087 68 ntBASIC0.7□□□□□ -2.3
NEK3P51956 RNU6-151P-201ENST00000364158 107 ntBASIC0.69□□□□□ -2.3
NEK3P51956 MIR513C-201ENST00000401352 84 ntBASIC0.69□□□□□ -2.3
NEK3P51956 RNU7-164P-201ENST00000459221 62 ntBASIC0.69□□□□□ -2.3
NEK3P51956 Y_RNA.651-201ENST00000459380 103 ntBASIC0.69□□□□□ -2.3
NEK3P51956 AC074198.2-201ENST00000508153 258 ntBASIC0.69□□□□□ -2.3
NEK3P51956 RNU4-54P-201ENST00000516428 129 ntBASIC0.69□□□□□ -2.3
NEK3P51956 RNU2-35P-201ENST00000516446 142 ntBASIC0.69□□□□□ -2.3
NEK3P51956 RNU6-403P-201ENST00000363163 104 ntBASIC0.68□□□□□ -2.3
NEK3P51956 AC096949.1-201ENST00000412047 152 ntBASIC0.68□□□□□ -2.3
NEK3P51956 AL512326.2-201ENST00000426359 151 ntBASIC0.68□□□□□ -2.3
NEK3P51956 RNU7-197P-201ENST00000458836 62 ntBASIC0.68□□□□□ -2.3
NEK3P51956 RNU6-135P-201ENST00000516769 101 ntBASIC0.68□□□□□ -2.3
NEK3P51956 uc_338.16-201ENST00000621804 95 ntBASIC0.68□□□□□ -2.3
NEK3P51956 Y_RNA.174-201ENST00000363781 105 ntBASIC0.67□□□□□ -2.3
NEK3P51956 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
NEK3P51956 RNU6-886P-201ENST00000384319 105 ntBASIC0.67□□□□□ -2.3
NEK3P51956 Y_RNA.13-201ENST00000362403 112 ntBASIC0.66□□□□□ -2.3
NEK3P51956 SNORD114-10-201ENST00000363409 72 ntBASIC0.66□□□□□ -2.3
NEK3P51956 RNU6-309P-201ENST00000364573 106 ntBASIC0.66□□□□□ -2.3
NEK3P51956 Y_RNA.555-201ENST00000384673 110 ntBASIC0.66□□□□□ -2.3
NEK3P51956 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
NEK3P51956 MIR548AE2-201ENST00000583456 67 ntBASIC0.66□□□□□ -2.3
NEK3P51956 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
NEK3P51956 Y_RNA.298-201ENST00000364960 107 ntBASIC0.65□□□□□ -2.31
NEK3P51956 SNORD116-18-201ENST00000383961 92 ntBASIC0.65□□□□□ -2.31
NEK3P51956 RNU4-69P-201ENST00000410677 143 ntBASIC0.65□□□□□ -2.31
NEK3P51956 Y_RNA.686-201ENST00000516548 134 ntBASIC0.65□□□□□ -2.31
NEK3P51956 Y_RNA.692-201ENST00000516627 105 ntBASIC0.65□□□□□ -2.31
NEK3P51956 MIR3144-201ENST00000579460 79 ntBASIC0.65□□□□□ -2.31
NEK3P51956 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.65□□□□□ -2.31
NEK3P51956 RNY1P11-201ENST00000363759 113 ntBASIC0.64□□□□□ -2.31
NEK3P51956 PCNPP3-201ENST00000393579 471 ntBASIC0.64□□□□□ -2.31
NEK3P51956 RNU7-123P-201ENST00000515911 60 ntBASIC0.64□□□□□ -2.31
NEK3P51956 RNU6-469P-201ENST00000516253 101 ntBASIC0.64□□□□□ -2.31
NEK3P51956 AC090425.1-201ENST00000610007 140 ntBASIC0.64□□□□□ -2.31
NEK3P51956 AL137067.1-201ENST00000615933 120 ntBASIC0.64□□□□□ -2.31
NEK3P51956 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.64□□□□□ -2.31
NEK3P51956 AP001340.1-201ENST00000624405 217 ntBASIC0.64□□□□□ -2.31
NEK3P51956 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
NEK3P51956 RNU4-58P-201ENST00000363192 141 ntBASIC0.63□□□□□ -2.31
NEK3P51956 SNORA32-201ENST00000384072 121 ntBASIC0.63□□□□□ -2.31
NEK3P51956 Y_RNA.466-201ENST00000384294 113 ntBASIC0.63□□□□□ -2.31
NEK3P51956 SNORA72.6-201ENST00000384520 129 ntBASIC0.63□□□□□ -2.31
NEK3P51956 RNA5SP436-201ENST00000516020 115 ntBASIC0.63□□□□□ -2.31
NEK3P51956 MIR548X2-201ENST00000579776 100 ntBASIC0.63□□□□□ -2.31
NEK3P51956 PVT1_3.1-201ENST00000620853 95 ntBASIC0.63□□□□□ -2.31
NEK3P51956 AL589743.1-201ENST00000551932 2712 ntBASIC0.62□□□□□ -2.31
NEK3P51956 RNU6-1130P-201ENST00000365434 107 ntBASIC0.62□□□□□ -2.31
NEK3P51956 Y_RNA.366-201ENST00000365540 102 ntBASIC0.62□□□□□ -2.31
NEK3P51956 Y_RNA.400-201ENST00000383963 111 ntBASIC0.62□□□□□ -2.31
NEK3P51956 Y_RNA.540-201ENST00000384638 111 ntBASIC0.62□□□□□ -2.31
NEK3P51956 SNORD77B-201ENST00000391112 67 ntBASIC0.62□□□□□ -2.31
NEK3P51956 AC108059.2-201ENST00000434626 151 ntBASIC0.62□□□□□ -2.31
NEK3P51956 RNU7-137P-201ENST00000516788 62 ntBASIC0.62□□□□□ -2.31
NEK3P51956 MIR3678-201ENST00000578455 94 ntBASIC0.62□□□□□ -2.31
NEK3P51956 MIR3121-201ENST00000579680 77 ntBASIC0.62□□□□□ -2.31
NEK3P51956 AC092634.7-201ENST00000621022 103 ntBASIC0.62□□□□□ -2.31
NEK3P51956 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
NEK3P51956 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.62□□□□□ -2.31
NEK3P51956 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.61□□□□□ -2.31
NEK3P51956 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
NEK3P51956 RNU6-915P-201ENST00000364943 103 ntBASIC0.61□□□□□ -2.31
NEK3P51956 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
NEK3P51956 MIR3671-201ENST00000580455 88 ntBASIC0.61□□□□□ -2.31
NEK3P51956 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
NEK3P51956 Y_RNA.536-201ENST00000384621 113 ntBASIC0.6□□□□□ -2.31
NEK3P51956 RNA5SP94-201ENST00000516917 108 ntBASIC0.6□□□□□ -2.31
NEK3P51956 AP001328.1-201ENST00000528550 176 ntBASIC0.6□□□□□ -2.31
NEK3P51956 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
NEK3P51956 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
NEK3P51956 Y_RNA.150-201ENST00000363562 102 ntBASIC0.59□□□□□ -2.31
NEK3P51956 Y_RNA.464-201ENST00000384282 110 ntBASIC0.59□□□□□ -2.31
NEK3P51956 RNU6-804P-201ENST00000384286 107 ntBASIC0.59□□□□□ -2.31
NEK3P51956 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
NEK3P51956 SNORD67.1-201ENST00000516618 108 ntBASIC0.59□□□□□ -2.31
NEK3P51956 Y_RNA.697-201ENST00000516776 113 ntBASIC0.59□□□□□ -2.31
NEK3P51956 RNA5SP480-201ENST00000516840 109 ntBASIC0.59□□□□□ -2.31
NEK3P51956 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.59□□□□□ -2.31
NEK3P51956 SNORD114-26-201ENST00000363543 72 ntBASIC0.58□□□□□ -2.32
NEK3P51956 Y_RNA.180-201ENST00000363867 113 ntBASIC0.58□□□□□ -2.32
NEK3P51956 RNU6-647P-201ENST00000364243 107 ntBASIC0.58□□□□□ -2.32
NEK3P51956 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
NEK3P51956 SNORA25.16-201ENST00000516741 121 ntBASIC0.58□□□□□ -2.32
NEK3P51956 DEFB131E-201ENST00000532329 154 ntBASIC0.58□□□□□ -2.32
NEK3P51956 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.58□□□□□ -2.32
NEK3P51956 Y_RNA.36-201ENST00000362602 112 ntBASIC0.57□□□□□ -2.32
NEK3P51956 RNU6-508P-201ENST00000363231 103 ntBASIC0.57□□□□□ -2.32
NEK3P51956 RNA5SP133-201ENST00000363368 119 ntBASIC0.57□□□□□ -2.32
NEK3P51956 Y_RNA.215-201ENST00000364204 112 ntBASIC0.57□□□□□ -2.32
NEK3P51956 RNY1P2-201ENST00000364820 117 ntBASIC0.57□□□□□ -2.32
NEK3P51956 Y_RNA.398-201ENST00000383952 99 ntBASIC0.57□□□□□ -2.32
NEK3P51956 RNU6-679P-201ENST00000391003 106 ntBASIC0.57□□□□□ -2.32
NEK3P51956 RNU6-460P-201ENST00000391158 108 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms