Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
USP11P51784 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
USP11P51784 AL161935.2-201ENST00000414627 60 ntBASIC2.23□□□□□ -2.05
USP11P51784 MTND5P40-201ENST00000559945 246 ntBASIC2.23□□□□□ -2.05
USP11P51784 PRELID3BP2-201ENST00000605362 201 ntBASIC2.23□□□□□ -2.05
USP11P51784 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP11P51784 RPL23AP42-201ENST00000471152 471 ntBASIC2.22□□□□□ -2.05
USP11P51784 MIR3935-201ENST00000583472 104 ntBASIC2.22□□□□□ -2.05
USP11P51784 HSBP1P2-201ENST00000299671 229 ntBASIC2.21□□□□□ -2.06
USP11P51784 RNU6-776P-201ENST00000364403 104 ntBASIC2.21□□□□□ -2.06
USP11P51784 RNU6-1022P-201ENST00000365049 104 ntBASIC2.21□□□□□ -2.06
USP11P51784 SNORD38.2-201ENST00000384470 69 ntBASIC2.21□□□□□ -2.06
USP11P51784 RNA5SP182-201ENST00000516064 82 ntBASIC2.21□□□□□ -2.06
USP11P51784 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.21□□□□□ -2.06
USP11P51784 AL662814.1-201ENST00000617364 121 ntBASIC2.21□□□□□ -2.06
USP11P51784 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USP11P51784 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USP11P51784 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USP11P51784 RNA5SP133-201ENST00000363368 119 ntBASIC2.2□□□□□ -2.06
USP11P51784 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
USP11P51784 MIR1302-7-201ENST00000408841 72 ntBASIC2.2□□□□□ -2.06
USP11P51784 AC087499.7-201ENST00000441958 109 ntBASIC2.2□□□□□ -2.06
USP11P51784 AC093729.1-201ENST00000513074 128 ntBASIC2.2□□□□□ -2.06
USP11P51784 MIR3192-201ENST00000584920 77 ntBASIC2.2□□□□□ -2.06
USP11P51784 uc_338.20-201ENST00000621563 178 ntBASIC2.2□□□□□ -2.06
USP11P51784 MIR4662A-201ENST00000637499 67 ntBASIC2.2□□□□□ -2.06
USP11P51784 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
USP11P51784 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
USP11P51784 RNA5SP99-201ENST00000364020 114 ntBASIC2.19□□□□□ -2.06
USP11P51784 RNU6-480P-201ENST00000384332 107 ntBASIC2.19□□□□□ -2.06
USP11P51784 MIR519C-201ENST00000385053 87 ntBASIC2.19□□□□□ -2.06
USP11P51784 SNORD41-201ENST00000386967 70 ntBASIC2.19□□□□□ -2.06
USP11P51784 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
USP11P51784 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.19□□□□□ -2.06
USP11P51784 RNU4-83P-201ENST00000410863 133 ntBASIC2.19□□□□□ -2.06
USP11P51784 AC027119.1-201ENST00000440877 241 ntBASIC2.19□□□□□ -2.06
USP11P51784 RNU7-153P-201ENST00000516455 62 ntBASIC2.19□□□□□ -2.06
USP11P51784 AC140658.3-201ENST00000567603 271 ntBASIC2.19□□□□□ -2.06
USP11P51784 AP000942.3-201ENST00000603702 160 ntBASIC2.19□□□□□ -2.06
USP11P51784 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.19□□□□□ -2.06
USP11P51784 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.19□□□□□ -2.06
USP11P51784 RNU6-949P-201ENST00000384040 107 ntBASIC2.18□□□□□ -2.06
USP11P51784 RNA5SP237-201ENST00000410414 113 ntBASIC2.18□□□□□ -2.06
USP11P51784 snoU13.2-201ENST00000459201 104 ntBASIC2.18□□□□□ -2.06
USP11P51784 AC090897.1-201ENST00000580909 226 ntBASIC2.18□□□□□ -2.06
USP11P51784 MIR4712-201ENST00000583750 82 ntBASIC2.18□□□□□ -2.06
USP11P51784 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
USP11P51784 AL353997.5-201ENST00000618886 171 ntBASIC2.18□□□□□ -2.06
USP11P51784 RNY1P2-201ENST00000364820 117 ntBASIC2.17□□□□□ -2.06
USP11P51784 MIR889-201ENST00000401280 79 ntBASIC2.17□□□□□ -2.06
USP11P51784 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.17□□□□□ -2.06
USP11P51784 snoU13.25-201ENST00000458945 104 ntBASIC2.17□□□□□ -2.06
USP11P51784 RPS29P11-201ENST00000496507 171 ntBASIC2.17□□□□□ -2.06
USP11P51784 RNU6-548P-201ENST00000517083 115 ntBASIC2.17□□□□□ -2.06
USP11P51784 AC133485.1-201ENST00000567176 124 ntBASIC2.17□□□□□ -2.06
USP11P51784 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.17□□□□□ -2.06
USP11P51784 U8.13-201ENST00000390842 128 ntBASIC2.16□□□□□ -2.06
USP11P51784 AL603825.1-201ENST00000438481 80 ntBASIC2.16□□□□□ -2.06
USP11P51784 HMGN2P23-201ENST00000456759 269 ntBASIC2.16□□□□□ -2.06
USP11P51784 RNU6-322P-201ENST00000516010 103 ntBASIC2.16□□□□□ -2.06
USP11P51784 AC138749.4-201ENST00000563970 127 ntBASIC2.16□□□□□ -2.06
USP11P51784 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.16□□□□□ -2.06
USP11P51784 AL096861.1-201ENST00000610899 123 ntBASIC2.16□□□□□ -2.06
USP11P51784 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
USP11P51784 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
USP11P51784 RNU6-439P-201ENST00000384188 106 ntBASIC2.15□□□□□ -2.07
USP11P51784 MIR588-201ENST00000384900 83 ntBASIC2.15□□□□□ -2.07
USP11P51784 MIR563-201ENST00000385080 79 ntBASIC2.15□□□□□ -2.07
USP11P51784 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
USP11P51784 SNORD111.1-201ENST00000516421 86 ntBASIC2.15□□□□□ -2.07
USP11P51784 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.15□□□□□ -2.07
USP11P51784 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
USP11P51784 Y_RNA.168-201ENST00000363740 102 ntBASIC2.14□□□□□ -2.07
USP11P51784 RNA5SP259-201ENST00000365541 109 ntBASIC2.14□□□□□ -2.07
USP11P51784 MIR513A1-201ENST00000385138 129 ntBASIC2.14□□□□□ -2.07
USP11P51784 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
USP11P51784 RNA5SP212-201ENST00000391223 107 ntBASIC2.14□□□□□ -2.07
USP11P51784 RNU6-519P-201ENST00000410590 108 ntBASIC2.14□□□□□ -2.07
USP11P51784 SNRPGP12-201ENST00000449481 213 ntBASIC2.14□□□□□ -2.07
USP11P51784 SNORD4B-201ENST00000459083 72 ntBASIC2.14□□□□□ -2.07
USP11P51784 RNU6-922P-201ENST00000516753 99 ntBASIC2.14□□□□□ -2.07
USP11P51784 RNU6-295P-201ENST00000516901 104 ntBASIC2.14□□□□□ -2.07
USP11P51784 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
USP11P51784 AL627230.6-201ENST00000611129 280 ntBASIC2.14□□□□□ -2.07
USP11P51784 MIR6740-201ENST00000618268 113 ntBASIC2.14□□□□□ -2.07
USP11P51784 WWP1P1-201ENST00000466609 2769 ntBASIC2.14□□□□□ -2.07
USP11P51784 MIR30D-201ENST00000362283 70 ntBASIC2.13□□□□□ -2.07
USP11P51784 RNU7-85P-201ENST00000458851 63 ntBASIC2.13□□□□□ -2.07
USP11P51784 MIR4500-201ENST00000579472 76 ntBASIC2.13□□□□□ -2.07
USP11P51784 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.13□□□□□ -2.07
USP11P51784 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
USP11P51784 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.13□□□□□ -2.07
USP11P51784 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
USP11P51784 SNORA25.3-201ENST00000363205 127 ntBASIC2.12□□□□□ -2.07
USP11P51784 RNA5SP48-201ENST00000363969 126 ntBASIC2.12□□□□□ -2.07
USP11P51784 RNU6-1229P-201ENST00000364295 107 ntBASIC2.12□□□□□ -2.07
USP11P51784 AC244636.1-201ENST00000421152 228 ntBASIC2.12□□□□□ -2.07
USP11P51784 JTBP1-201ENST00000441314 247 ntBASIC2.12□□□□□ -2.07
USP11P51784 AC005908.1-201ENST00000468701 347 ntBASIC2.12□□□□□ -2.07
USP11P51784 AC139453.2-201ENST00000487255 133 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms