Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AL512326.2-201ENST00000426359 151 ntBASIC0.34□□□□□ -2.36
RXRGP48443 RNU6-1023P-201ENST00000516137 106 ntBASIC0.34□□□□□ -2.36
RXRGP48443 SNORA25.16-201ENST00000516741 121 ntBASIC0.34□□□□□ -2.36
RXRGP48443 MTND5P34-201ENST00000568888 325 ntBASIC0.34□□□□□ -2.36
RXRGP48443 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.36
RXRGP48443 Y_RNA.144-201ENST00000363521 113 ntBASIC0.33□□□□□ -2.36
RXRGP48443 RNU6-379P-201ENST00000363813 104 ntBASIC0.33□□□□□ -2.36
RXRGP48443 RNU6-1229P-201ENST00000364295 107 ntBASIC0.33□□□□□ -2.36
RXRGP48443 RNU6-275P-201ENST00000364910 107 ntBASIC0.33□□□□□ -2.36
RXRGP48443 RNU6-702P-201ENST00000364982 107 ntBASIC0.33□□□□□ -2.36
RXRGP48443 RNU6-949P-201ENST00000384040 107 ntBASIC0.33□□□□□ -2.36
RXRGP48443 SNORA32-201ENST00000384072 121 ntBASIC0.33□□□□□ -2.36
RXRGP48443 Y_RNA.452-201ENST00000384202 108 ntBASIC0.33□□□□□ -2.36
RXRGP48443 SNORA18-201ENST00000384416 132 ntBASIC0.33□□□□□ -2.36
RXRGP48443 Y_RNA.588-201ENST00000391254 102 ntBASIC0.33□□□□□ -2.36
RXRGP48443 RNU6-388P-201ENST00000517012 105 ntBASIC0.33□□□□□ -2.36
RXRGP48443 RNU6-389P-201ENST00000517048 105 ntBASIC0.33□□□□□ -2.36
RXRGP48443 Y_RNA.757-201ENST00000578934 114 ntBASIC0.33□□□□□ -2.36
RXRGP48443 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.33□□□□□ -2.36
RXRGP48443 RNU6-349P-201ENST00000362402 107 ntBASIC0.32□□□□□ -2.36
RXRGP48443 RNY1P13-201ENST00000365030 105 ntBASIC0.32□□□□□ -2.36
RXRGP48443 SNORA8.2-201ENST00000384372 139 ntBASIC0.32□□□□□ -2.36
RXRGP48443 Y_RNA.793-201ENST00000411222 111 ntBASIC0.32□□□□□ -2.36
RXRGP48443 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.32□□□□□ -2.36
RXRGP48443 RNA5SP236-201ENST00000516169 116 ntBASIC0.32□□□□□ -2.36
RXRGP48443 RNU4-71P-201ENST00000516258 113 ntBASIC0.32□□□□□ -2.36
RXRGP48443 RNU2-35P-201ENST00000516446 142 ntBASIC0.32□□□□□ -2.36
RXRGP48443 AC133485.4-201ENST00000561835 220 ntBASIC0.32□□□□□ -2.36
RXRGP48443 MIR4491-201ENST00000581087 68 ntBASIC0.32□□□□□ -2.36
RXRGP48443 AL359881.1-201ENST00000602916 267 ntBASIC0.32□□□□□ -2.36
RXRGP48443 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
RXRGP48443 Y_RNA.32-201ENST00000362589 110 ntBASIC0.31□□□□□ -2.36
RXRGP48443 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
RXRGP48443 SNORA36.1-201ENST00000363424 132 ntBASIC0.31□□□□□ -2.36
RXRGP48443 RNA5SP245-201ENST00000364239 121 ntBASIC0.31□□□□□ -2.36
RXRGP48443 RNY1P6-201ENST00000384193 109 ntBASIC0.31□□□□□ -2.36
RXRGP48443 RNU6-463P-201ENST00000384340 107 ntBASIC0.31□□□□□ -2.36
RXRGP48443 RNU6-1307P-201ENST00000391012 103 ntBASIC0.31□□□□□ -2.36
RXRGP48443 AC108059.2-201ENST00000434626 151 ntBASIC0.31□□□□□ -2.36
RXRGP48443 RNU6-240P-201ENST00000516098 97 ntBASIC0.31□□□□□ -2.36
RXRGP48443 Y_RNA.686-201ENST00000516548 134 ntBASIC0.31□□□□□ -2.36
RXRGP48443 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
RXRGP48443 AC105081.1-201ENST00000617727 106 ntBASIC0.31□□□□□ -2.36
RXRGP48443 Y_RNA.83-201ENST00000363005 113 ntBASIC0.3□□□□□ -2.36
RXRGP48443 RNA5SP257-201ENST00000363023 116 ntBASIC0.3□□□□□ -2.36
RXRGP48443 SNORD118-201ENST00000363593 134 ntBASIC0.3□□□□□ -2.36
RXRGP48443 Y_RNA.200-201ENST00000364018 102 ntBASIC0.3□□□□□ -2.36
RXRGP48443 Y_RNA.366-201ENST00000365540 102 ntBASIC0.3□□□□□ -2.36
RXRGP48443 RNU6-1086P-201ENST00000410930 100 ntBASIC0.3□□□□□ -2.36
RXRGP48443 AL022718.1-201ENST00000412004 84 ntBASIC0.3□□□□□ -2.36
RXRGP48443 RNU6-861P-201ENST00000516745 106 ntBASIC0.3□□□□□ -2.36
RXRGP48443 AC009779.6-201ENST00000603972 165 ntBASIC0.3□□□□□ -2.36
RXRGP48443 AC108081.1-201ENST00000604358 221 ntBASIC0.3□□□□□ -2.36
RXRGP48443 Y_RNA.75-201ENST00000362927 97 ntBASIC0.29□□□□□ -2.36
RXRGP48443 RNA5SP62-201ENST00000363457 110 ntBASIC0.29□□□□□ -2.36
RXRGP48443 SNORA63.5-201ENST00000363548 123 ntBASIC0.29□□□□□ -2.36
RXRGP48443 Y_RNA.251-201ENST00000364551 99 ntBASIC0.29□□□□□ -2.36
RXRGP48443 RNU6-309P-201ENST00000364573 106 ntBASIC0.29□□□□□ -2.36
RXRGP48443 Y_RNA.297-201ENST00000364950 91 ntBASIC0.29□□□□□ -2.36
RXRGP48443 Y_RNA.497-201ENST00000384447 98 ntBASIC0.29□□□□□ -2.36
RXRGP48443 RNA5SP144-201ENST00000410846 116 ntBASIC0.29□□□□□ -2.36
RXRGP48443 Y_RNA.651-201ENST00000459380 103 ntBASIC0.29□□□□□ -2.36
RXRGP48443 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
RXRGP48443 RNU6-138P-201ENST00000515952 107 ntBASIC0.29□□□□□ -2.36
RXRGP48443 Y_RNA.681-201ENST00000516445 113 ntBASIC0.29□□□□□ -2.36
RXRGP48443 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
RXRGP48443 Y_RNA.697-201ENST00000516776 113 ntBASIC0.29□□□□□ -2.36
RXRGP48443 DEFB131E-201ENST00000532329 154 ntBASIC0.29□□□□□ -2.36
RXRGP48443 MIR4514-201ENST00000581410 57 ntBASIC0.29□□□□□ -2.36
RXRGP48443 MIR2909-201ENST00000617113 69 ntBASIC0.29□□□□□ -2.36
RXRGP48443 Y_RNA.233-201ENST00000364407 101 ntBASIC0.28□□□□□ -2.36
RXRGP48443 RNU6-1104P-201ENST00000384723 104 ntBASIC0.28□□□□□ -2.36
RXRGP48443 MT-TI-201ENST00000387365 69 ntBASIC0.28□□□□□ -2.36
RXRGP48443 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.28□□□□□ -2.36
RXRGP48443 SNRPGP12-201ENST00000449481 213 ntBASIC0.28□□□□□ -2.36
RXRGP48443 RNA5SP272-201ENST00000516095 111 ntBASIC0.28□□□□□ -2.36
RXRGP48443 SNORD67.1-201ENST00000516618 108 ntBASIC0.28□□□□□ -2.36
RXRGP48443 RNU6-531P-201ENST00000516694 104 ntBASIC0.28□□□□□ -2.36
RXRGP48443 RNU6-1271P-201ENST00000517049 105 ntBASIC0.28□□□□□ -2.36
RXRGP48443 MIR548AE2-201ENST00000583456 67 ntBASIC0.28□□□□□ -2.36
RXRGP48443 RNU6-1020P-201ENST00000363684 107 ntBASIC0.27□□□□□ -2.37
RXRGP48443 RNU6-682P-201ENST00000363843 106 ntBASIC0.27□□□□□ -2.37
RXRGP48443 Y_RNA.294-201ENST00000364916 102 ntBASIC0.27□□□□□ -2.37
RXRGP48443 RNU6-1130P-201ENST00000365434 107 ntBASIC0.27□□□□□ -2.37
RXRGP48443 RNU6-187P-201ENST00000384139 106 ntBASIC0.27□□□□□ -2.37
RXRGP48443 RNU6-291P-201ENST00000384720 107 ntBASIC0.27□□□□□ -2.37
RXRGP48443 RNA5SP63-201ENST00000391225 112 ntBASIC0.27□□□□□ -2.37
RXRGP48443 RNU7-113P-201ENST00000459273 62 ntBASIC0.27□□□□□ -2.37
RXRGP48443 RNU7-79P-201ENST00000516082 62 ntBASIC0.27□□□□□ -2.37
RXRGP48443 IGKV1-22-201ENST00000524313 326 ntBASIC0.27□□□□□ -2.37
RXRGP48443 MIR4431-201ENST00000579990 94 ntBASIC0.27□□□□□ -2.37
RXRGP48443 Y_RNA.120-201ENST00000363304 110 ntBASIC0.26□□□□□ -2.37
RXRGP48443 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
RXRGP48443 AL603914.1-201ENST00000401964 204 ntBASIC0.26□□□□□ -2.37
RXRGP48443 Y_RNA.644-201ENST00000459006 113 ntBASIC0.26□□□□□ -2.37
RXRGP48443 Y_RNA.674-201ENST00000516362 113 ntBASIC0.26□□□□□ -2.37
RXRGP48443 RNA5SP33-201ENST00000516687 98 ntBASIC0.26□□□□□ -2.37
RXRGP48443 MIR4752-201ENST00000579672 72 ntBASIC0.26□□□□□ -2.37
RXRGP48443 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.26□□□□□ -2.37
RXRGP48443 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms