Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 AP003072.1-201ENST00000531740 145 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 MIR4752-201ENST00000579672 72 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.01□□□□□ -2.41
CXCL12P48061 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CXCL12P48061 SNORA63.5-201ENST00000363548 123 ntBASIC-0.02□□□□□ -2.41
CXCL12P48061 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.02□□□□□ -2.41
CXCL12P48061 RNY1P6-201ENST00000384193 109 ntBASIC-0.02□□□□□ -2.41
CXCL12P48061 RNA5SP144-201ENST00000410846 116 ntBASIC-0.02□□□□□ -2.41
CXCL12P48061 RNU2-38P-201ENST00000410856 79 ntBASIC-0.02□□□□□ -2.41
CXCL12P48061 RNU7-129P-201ENST00000516128 62 ntBASIC-0.02□□□□□ -2.41
CXCL12P48061 RNU7-35P-201ENST00000517174 62 ntBASIC-0.02□□□□□ -2.41
CXCL12P48061 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 RNA5SP133-201ENST00000363368 119 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 RNY4P28-201ENST00000365281 93 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 RNU6-643P-201ENST00000384018 107 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 SNORA32-201ENST00000384072 121 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 MIR760-201ENST00000390220 80 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
CXCL12P48061 RNU6-127P-201ENST00000390897 107 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.03□□□□□ -2.41
CXCL12P48061 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 U6.109-201ENST00000636749 87 ntBASIC-0.03□□□□□ -2.41
CXCL12P48061 SNORD114-5-201ENST00000362928 70 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 RNU4-58P-201ENST00000363192 141 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 MIR643-201ENST00000385267 97 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 RNU7-113P-201ENST00000459273 62 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 RNA5SP33-201ENST00000516687 98 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 MIR4308-201ENST00000580634 81 ntBASIC-0.04□□□□□ -2.42
CXCL12P48061 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 SNORA25.7-201ENST00000364375 127 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 SNORA2A-201ENST00000383885 135 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 SNORD127-201ENST00000458892 86 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 AC006504.6-201ENST00000590142 199 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 MIR499B-201ENST00000636498 73 ntBASIC-0.05□□□□□ -2.42
CXCL12P48061 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 SNORD27-201ENST00000363981 72 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 RNA5SP128-201ENST00000365305 116 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 RNU4-70P-201ENST00000384579 139 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 AL022718.1-201ENST00000412004 84 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 MTND2P23-201ENST00000422990 651 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 MTND1P19-201ENST00000511780 315 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 AC138749.4-201ENST00000563970 127 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 AL359881.1-201ENST00000602916 267 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 RNU1-29P-201ENST00000606574 126 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.06□□□□□ -2.42
CXCL12P48061 MIR101-2-201ENST00000362195 79 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 SNORD115-24-201ENST00000363528 82 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 RNU6-275P-201ENST00000364910 107 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 MIR606-201ENST00000384851 96 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 MIR548H3-201ENST00000408771 118 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 AC108059.2-201ENST00000434626 151 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 RPL39P34-201ENST00000477141 156 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 RNU6-848P-201ENST00000515948 107 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 RNU6-617P-201ENST00000516147 107 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 RNU6-473P-201ENST00000516164 107 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 SNORD67.1-201ENST00000516618 108 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 RNU7-137P-201ENST00000516788 62 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 IGLVI-20-201ENST00000519296 130 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 AL117187.1-201ENST00000555482 181 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 MIR548AE2-201ENST00000583456 67 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.07□□□□□ -2.42
CXCL12P48061 AC008737.2-201ENST00000599446 118 ntBASIC-0.07□□□□□ -2.42
CXCL12P48061 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 SNORD115-2-201ENST00000362842 82 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 RNU6-702P-201ENST00000364982 107 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 SNORD115-20-201ENST00000365099 82 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 MIR593-201ENST00000384856 100 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 MIR610-201ENST00000385139 96 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CXCL12P48061 RNA5SP236-201ENST00000516169 116 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
CXCL12P48061 MIR4290-201ENST00000583807 95 ntBASIC-0.08□□□□□ -2.42
CXCL12P48061 AC105081.1-201ENST00000617727 106 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms