Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 RNU6-1014P-201ENST00000383940 103 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RNU6-106P-201ENST00000384405 107 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 SNORA2B-201ENST00000384583 137 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 MIR1912-201ENST00000410389 80 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 AL591704.2-201ENST00000421658 181 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RPL39P25-201ENST00000449384 154 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.32□□□□□ -2.2
NPTX2P47972 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RNU7-137P-201ENST00000516788 62 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.32□□□□□ -2.2
NPTX2P47972 RNU6-94P-201ENST00000607728 107 ntBASIC1.32□□□□□ -2.2
NPTX2P47972 RNU6-392P-201ENST00000364926 101 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 SNORA80D-201ENST00000384488 135 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 Y_RNA.507-201ENST00000384500 99 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 MIR206-201ENST00000384872 86 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NPTX2P47972 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 SNORD79.1-201ENST00000516069 84 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 RNU7-40P-201ENST00000516397 64 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 AC036111.3-201ENST00000526389 112 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 AC027335.2-201ENST00000624030 375 ntBASIC1.31□□□□□ -2.2
NPTX2P47972 RNU6-949P-201ENST00000384040 107 ntBASIC1.3□□□□□ -2.2
NPTX2P47972 RNU6-1307P-201ENST00000391012 103 ntBASIC1.3□□□□□ -2.2
NPTX2P47972 RNU6-554P-201ENST00000410466 106 ntBASIC1.3□□□□□ -2.2
NPTX2P47972 AL353813.1-201ENST00000440700 253 ntBASIC1.3□□□□□ -2.2
NPTX2P47972 RNU7-2P-201ENST00000516096 62 ntBASIC1.3□□□□□ -2.2
NPTX2P47972 RNU6-521P-201ENST00000516663 105 ntBASIC1.3□□□□□ -2.2
NPTX2P47972 MIR6078-201ENST00000611069 100 ntBASIC1.3□□□□□ -2.2
NPTX2P47972 SNORD114-10-201ENST00000363409 72 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 Y_RNA.155-201ENST00000363632 101 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 Y_RNA.163-201ENST00000363702 113 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 RNU6-153P-201ENST00000364422 104 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 SNORD115-35-201ENST00000365122 82 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 MT-TF-201ENST00000387314 71 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 SNORA7.5-201ENST00000410672 110 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 MTATP6P29-201ENST00000415057 132 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 snoU13.21-201ENST00000459368 105 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 RNA5SP404-201ENST00000517118 132 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 AC023827.1-201ENST00000569247 97 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 AC105081.1-201ENST00000617727 106 ntBASIC1.29□□□□□ -2.2
NPTX2P47972 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
NPTX2P47972 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
NPTX2P47972 RNU6-409P-201ENST00000384114 104 ntBASIC1.28□□□□□ -2.2
NPTX2P47972 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
NPTX2P47972 RNU6-679P-201ENST00000391003 106 ntBASIC1.28□□□□□ -2.2
NPTX2P47972 RNU6-733P-201ENST00000410759 104 ntBASIC1.28□□□□□ -2.2
NPTX2P47972 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.28□□□□□ -2.2
NPTX2P47972 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.28□□□□□ -2.2
NPTX2P47972 AC106800.4-201ENST00000614905 153 ntBASIC1.28□□□□□ -2.2
NPTX2P47972 AC012676.2-201ENST00000619258 186 ntBASIC1.28□□□□□ -2.2
NPTX2P47972 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
NPTX2P47972 Y_RNA.448-201ENST00000384185 108 ntBASIC1.27□□□□□ -2.21
NPTX2P47972 MIR605-201ENST00000385078 83 ntBASIC1.27□□□□□ -2.21
NPTX2P47972 RNU6-1321P-201ENST00000390905 107 ntBASIC1.27□□□□□ -2.21
NPTX2P47972 U8.15-201ENST00000390947 134 ntBASIC1.27□□□□□ -2.21
NPTX2P47972 MIR1302-5-201ENST00000408164 150 ntBASIC1.27□□□□□ -2.21
NPTX2P47972 RNU7-90P-201ENST00000459216 62 ntBASIC1.27□□□□□ -2.21
NPTX2P47972 AC008163.1-202ENST00000636004 2889 ntBASIC1.27□□□□□ -2.21
NPTX2P47972 MIR450A1-201ENST00000362262 91 ntBASIC1.26□□□□□ -2.21
NPTX2P47972 Y_RNA.360-201ENST00000365512 102 ntBASIC1.26□□□□□ -2.21
NPTX2P47972 RNU6-147P-201ENST00000383983 107 ntBASIC1.26□□□□□ -2.21
NPTX2P47972 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
NPTX2P47972 AL031737.1-201ENST00000450125 223 ntBASIC1.26□□□□□ -2.21
NPTX2P47972 MIR18B-201ENST00000454574 71 ntBASIC1.26□□□□□ -2.21
NPTX2P47972 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
NPTX2P47972 SNORD83.1-201ENST00000411362 77 ntBASIC1.25□□□□□ -2.21
NPTX2P47972 AC096949.1-201ENST00000412047 152 ntBASIC1.25□□□□□ -2.21
NPTX2P47972 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
NPTX2P47972 RNY1P10-201ENST00000363268 113 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-756P-201ENST00000383997 107 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 MIR577-201ENST00000385196 96 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-447P-201ENST00000410293 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-1118P-201ENST00000410382 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-1076P-201ENST00000410397 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-355P-201ENST00000410427 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-791P-201ENST00000410467 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-705P-201ENST00000410601 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 SNORA19.1-201ENST00000410656 129 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-1100P-201ENST00000410691 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-860P-201ENST00000410860 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-1217P-201ENST00000411276 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-785P-201ENST00000411324 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-1018P-201ENST00000516577 106 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 MIR4694-201ENST00000578534 80 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 U6.90-201ENST00000614007 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 U6.70-201ENST00000620287 104 ntBASIC1.24□□□□□ -2.21
NPTX2P47972 RNU6-766P-201ENST00000362478 107 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 RNU6-1313P-201ENST00000362622 102 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 Y_RNA.328-201ENST00000365208 113 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 SNORA51.5-201ENST00000384126 131 ntBASIC1.23□□□□□ -2.21
NPTX2P47972 RNU6-1201P-201ENST00000384227 107 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms