Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SNORD114-10-201ENST00000363409 72 ntBASIC-0.96□□□□□ -2.56
RPA3P35244 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.96□□□□□ -2.56
RPA3P35244 MIR616-201ENST00000385293 97 ntBASIC-0.96□□□□□ -2.56
RPA3P35244 RNU6-121P-201ENST00000410525 99 ntBASIC-0.96□□□□□ -2.56
RPA3P35244 RNU6-561P-201ENST00000516222 102 ntBASIC-0.96□□□□□ -2.56
RPA3P35244 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.96□□□□□ -2.56
RPA3P35244 RNA5SP66-201ENST00000517178 101 ntBASIC-0.96□□□□□ -2.56
RPA3P35244 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
RPA3P35244 AC108676.2-201ENST00000605225 163 ntBASIC-0.96□□□□□ -2.56
RPA3P35244 MIR181B2-201ENST00000385004 89 ntBASIC-0.97□□□□□ -2.56
RPA3P35244 MIR1265-201ENST00000408444 86 ntBASIC-0.97□□□□□ -2.56
RPA3P35244 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.97□□□□□ -2.56
RPA3P35244 RNU7-13P-201ENST00000516413 62 ntBASIC-0.97□□□□□ -2.56
RPA3P35244 uc_338.10-201ENST00000621872 182 ntBASIC-0.97□□□□□ -2.56
RPA3P35244 SNORD115-2-201ENST00000362842 82 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 SNORD115-20-201ENST00000365099 82 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 SNORA79-201ENST00000408376 140 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 RNU7-74P-201ENST00000459104 62 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 MIR4500-201ENST00000579472 76 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.98□□□□□ -2.57
RPA3P35244 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
RPA3P35244 UBE2WP1-201ENST00000362030 340 ntBASIC-0.99□□□□□ -2.57
RPA3P35244 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.99□□□□□ -2.57
RPA3P35244 SNORA63.7-201ENST00000365579 123 ntBASIC-0.99□□□□□ -2.57
RPA3P35244 RNY1P6-201ENST00000384193 109 ntBASIC-0.99□□□□□ -2.57
RPA3P35244 SNORD19B-201ENST00000459623 84 ntBASIC-0.99□□□□□ -2.57
RPA3P35244 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
RPA3P35244 MIR548AE2-201ENST00000583456 67 ntBASIC-0.99□□□□□ -2.57
RPA3P35244 RNU6-1289P-201ENST00000384431 106 ntBASIC-1□□□□□ -2.57
RPA3P35244 RNU6-455P-201ENST00000384681 107 ntBASIC-1□□□□□ -2.57
RPA3P35244 SNORA3B-201ENST00000391305 131 ntBASIC-1□□□□□ -2.57
RPA3P35244 AC098614.3-201ENST00000438957 440 ntBASIC-1□□□□□ -2.57
RPA3P35244 RNU6-570P-201ENST00000517051 105 ntBASIC-1□□□□□ -2.57
RPA3P35244 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1□□□□□ -2.57
RPA3P35244 MTND5P40-201ENST00000559945 246 ntBASIC-1□□□□□ -2.57
RPA3P35244 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1□□□□□ -2.57
RPA3P35244 MIR224-201ENST00000384889 81 ntBASIC-1.01□□□□□ -2.57
RPA3P35244 RNU7-195P-201ENST00000458793 62 ntBASIC-1.01□□□□□ -2.57
RPA3P35244 RNA5SP395-201ENST00000516567 118 ntBASIC-1.01□□□□□ -2.57
RPA3P35244 YWHAEP2-201ENST00000580066 112 ntBASIC-1.01□□□□□ -2.57
RPA3P35244 AL132765.2-201ENST00000610812 351 ntBASIC-1.01□□□□□ -2.57
RPA3P35244 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 SNORD95.1-201ENST00000364099 68 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 RNA5SP368-201ENST00000364298 116 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 RNU6-47P-201ENST00000383866 107 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 AL603914.1-201ENST00000401964 204 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 RNU6-735P-201ENST00000410612 107 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 RNU6-175P-201ENST00000516896 107 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 MIR4436A-201ENST00000585278 85 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 AC069503.3-201ENST00000618674 145 ntBASIC-1.02□□□□□ -2.57
RPA3P35244 SNORD114-14-201ENST00000362723 75 ntBASIC-1.03□□□□□ -2.57
RPA3P35244 RNU6-450P-201ENST00000364654 107 ntBASIC-1.03□□□□□ -2.57
RPA3P35244 SNORD114-29-201ENST00000364819 70 ntBASIC-1.03□□□□□ -2.57
RPA3P35244 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.03□□□□□ -2.57
RPA3P35244 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.03□□□□□ -2.57
RPA3P35244 RNU6-728P-201ENST00000365375 104 ntBASIC-1.03□□□□□ -2.57
RPA3P35244 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.03□□□□□ -2.57
RPA3P35244 AC093726.3-201ENST00000637588 150 ntBASIC-1.03□□□□□ -2.57
RPA3P35244 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.04□□□□□ -2.58
RPA3P35244 RNU6-524P-201ENST00000384270 107 ntBASIC-1.04□□□□□ -2.58
RPA3P35244 RNA5SP169-201ENST00000517268 117 ntBASIC-1.04□□□□□ -2.58
RPA3P35244 MIR548AE1-201ENST00000583292 70 ntBASIC-1.04□□□□□ -2.58
RPA3P35244 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.05□□□□□ -2.58
RPA3P35244 MIR539-201ENST00000365690 78 ntBASIC-1.05□□□□□ -2.58
RPA3P35244 MIR519E-201ENST00000385075 84 ntBASIC-1.05□□□□□ -2.58
RPA3P35244 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.05□□□□□ -2.58
RPA3P35244 RNA5SP25-201ENST00000410815 110 ntBASIC-1.05□□□□□ -2.58
RPA3P35244 SNORD63B-201ENST00000411005 70 ntBASIC-1.05□□□□□ -2.58
RPA3P35244 SNORD116-25-201ENST00000516517 92 ntBASIC-1.05□□□□□ -2.58
RPA3P35244 MIR548AG2-201ENST00000581228 64 ntBASIC-1.05□□□□□ -2.58
RPA3P35244 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 RNU6-978P-201ENST00000364371 103 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 MIR624-201ENST00000385217 97 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 MIR519A1-201ENST00000385257 85 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 RNU6-823P-201ENST00000391042 103 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 MIR548I2-201ENST00000408348 149 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 AC093423.1-201ENST00000440817 142 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 MIR1270-201ENST00000459320 83 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.06□□□□□ -2.58
RPA3P35244 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 RNU6-154P-201ENST00000384306 106 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 MIR9-2-201ENST00000384838 87 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 MIR1252-201ENST00000408861 65 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 RNU4-43P-201ENST00000410628 137 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 AL445193.1-201ENST00000441183 141 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.07□□□□□ -2.58
RPA3P35244 RNU7-48P-201ENST00000458875 63 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 SERF1AP1-201ENST00000514575 187 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 SNORA40.15-201ENST00000516884 107 ntBASIC-1.07□□□□□ -2.58
RPA3P35244 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms