Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 JTBP1-201ENST00000441314 247 ntBASIC2.38□□□□□ -2.03
GPC1P35052 RNU7-106P-201ENST00000459514 67 ntBASIC2.38□□□□□ -2.03
GPC1P35052 RNU6-75P-201ENST00000515944 104 ntBASIC2.38□□□□□ -2.03
GPC1P35052 RNU6-871P-201ENST00000516122 100 ntBASIC2.38□□□□□ -2.03
GPC1P35052 RNU6-70P-201ENST00000516438 60 ntBASIC2.38□□□□□ -2.03
GPC1P35052 SNORA25.16-201ENST00000516741 121 ntBASIC2.38□□□□□ -2.03
GPC1P35052 RNU6-807P-201ENST00000516805 107 ntBASIC2.38□□□□□ -2.03
GPC1P35052 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
GPC1P35052 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
GPC1P35052 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
GPC1P35052 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
GPC1P35052 SNORD93-201ENST00000408813 74 ntBASIC2.37□□□□□ -2.03
GPC1P35052 AL161935.2-201ENST00000414627 60 ntBASIC2.37□□□□□ -2.03
GPC1P35052 AC108938.1-201ENST00000451204 136 ntBASIC2.37□□□□□ -2.03
GPC1P35052 RNU6-448P-201ENST00000517052 107 ntBASIC2.37□□□□□ -2.03
GPC1P35052 AC121758.2-201ENST00000553271 193 ntBASIC2.37□□□□□ -2.03
GPC1P35052 MIR4319-201ENST00000577285 85 ntBASIC2.37□□□□□ -2.03
GPC1P35052 MIR5694-201ENST00000581190 76 ntBASIC2.37□□□□□ -2.03
GPC1P35052 SNORD92-201ENST00000585078 85 ntBASIC2.37□□□□□ -2.03
GPC1P35052 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
GPC1P35052 ZNF658B-202ENST00000615961 3375 ntBASIC2.37□□□□□ -2.03
GPC1P35052 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
GPC1P35052 RNU6-403P-201ENST00000363163 104 ntBASIC2.36□□□□□ -2.03
GPC1P35052 RNU4-58P-201ENST00000363192 141 ntBASIC2.36□□□□□ -2.03
GPC1P35052 Y_RNA.532-201ENST00000384590 113 ntBASIC2.36□□□□□ -2.03
GPC1P35052 MT-TF-201ENST00000387314 71 ntBASIC2.36□□□□□ -2.03
GPC1P35052 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
GPC1P35052 SNORD63B-201ENST00000411005 70 ntBASIC2.36□□□□□ -2.03
GPC1P35052 RN7SL274P-201ENST00000492268 272 ntBASIC2.36□□□□□ -2.03
GPC1P35052 RNU6-1015P-201ENST00000517121 99 ntBASIC2.36□□□□□ -2.03
GPC1P35052 MIR4491-201ENST00000581087 68 ntBASIC2.36□□□□□ -2.03
GPC1P35052 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.36□□□□□ -2.03
GPC1P35052 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
GPC1P35052 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
GPC1P35052 MIR449A-201ENST00000362113 91 ntBASIC2.35□□□□□ -2.03
GPC1P35052 RNU6-208P-201ENST00000362431 107 ntBASIC2.35□□□□□ -2.03
GPC1P35052 RNU6-957P-201ENST00000363652 99 ntBASIC2.35□□□□□ -2.03
GPC1P35052 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
GPC1P35052 SNORA40.18-201ENST00000391200 128 ntBASIC2.35□□□□□ -2.03
GPC1P35052 SNORD23.1-201ENST00000408212 104 ntBASIC2.35□□□□□ -2.03
GPC1P35052 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.35□□□□□ -2.03
GPC1P35052 Y_RNA.681-201ENST00000516445 113 ntBASIC2.35□□□□□ -2.03
GPC1P35052 GHRLOS.1-201ENST00000610995 70 ntBASIC2.35□□□□□ -2.03
GPC1P35052 AC062016.1-201ENST00000355719 319 ntBASIC2.34□□□□□ -2.03
GPC1P35052 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
GPC1P35052 RNA5SP95-201ENST00000410319 137 ntBASIC2.34□□□□□ -2.03
GPC1P35052 RNU6-539P-201ENST00000516665 103 ntBASIC2.34□□□□□ -2.03
GPC1P35052 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GPC1P35052 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
GPC1P35052 MT-TN-201ENST00000387400 73 ntBASIC2.33□□□□□ -2.04
GPC1P35052 RNA5SP184-201ENST00000411071 108 ntBASIC2.33□□□□□ -2.04
GPC1P35052 RPL30P7-201ENST00000479312 323 ntBASIC2.33□□□□□ -2.04
GPC1P35052 MIR3162-201ENST00000581818 82 ntBASIC2.33□□□□□ -2.04
GPC1P35052 MIR6516-201ENST00000630554 81 ntBASIC2.33□□□□□ -2.04
GPC1P35052 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
GPC1P35052 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
GPC1P35052 RNU6-654P-201ENST00000364373 107 ntBASIC2.32□□□□□ -2.04
GPC1P35052 Y_RNA.264-201ENST00000364665 102 ntBASIC2.32□□□□□ -2.04
GPC1P35052 MIR144-201ENST00000384886 86 ntBASIC2.32□□□□□ -2.04
GPC1P35052 snoU13.25-201ENST00000458945 104 ntBASIC2.32□□□□□ -2.04
GPC1P35052 RNU2-19P-201ENST00000517288 84 ntBASIC2.32□□□□□ -2.04
GPC1P35052 U4.3-201ENST00000621047 82 ntBASIC2.32□□□□□ -2.04
GPC1P35052 MIR664A-201ENST00000626086 82 ntBASIC2.32□□□□□ -2.04
GPC1P35052 MIR1297-201ENST00000637311 77 ntBASIC2.32□□□□□ -2.04
GPC1P35052 MIR103A2-201ENST00000362154 78 ntBASIC2.31□□□□□ -2.04
GPC1P35052 MIR101-2-201ENST00000362195 79 ntBASIC2.31□□□□□ -2.04
GPC1P35052 SNORD114-30-201ENST00000364448 72 ntBASIC2.31□□□□□ -2.04
GPC1P35052 SNORD90-201ENST00000391145 111 ntBASIC2.31□□□□□ -2.04
GPC1P35052 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
GPC1P35052 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC1P35052 Y_RNA.340-201ENST00000365330 92 ntBASIC2.3□□□□□ -2.04
GPC1P35052 SNORA67.4-201ENST00000384688 142 ntBASIC2.3□□□□□ -2.04
GPC1P35052 MIR518E-201ENST00000385252 88 ntBASIC2.3□□□□□ -2.04
GPC1P35052 AL513328.1-201ENST00000446460 224 ntBASIC2.3□□□□□ -2.04
GPC1P35052 AC125388.1-201ENST00000459631 156 ntBASIC2.3□□□□□ -2.04
GPC1P35052 AC055731.1-201ENST00000474387 401 ntBASIC2.3□□□□□ -2.04
GPC1P35052 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC1P35052 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
GPC1P35052 RNA5SP126-201ENST00000365092 109 ntBASIC2.29□□□□□ -2.04
GPC1P35052 RNU1-36P-201ENST00000365130 165 ntBASIC2.29□□□□□ -2.04
GPC1P35052 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
GPC1P35052 Y_RNA.588-201ENST00000391254 102 ntBASIC2.29□□□□□ -2.04
GPC1P35052 MIR1185-1-201ENST00000408598 86 ntBASIC2.29□□□□□ -2.04
GPC1P35052 RNU7-195P-201ENST00000458793 62 ntBASIC2.29□□□□□ -2.04
GPC1P35052 RNU6-1194P-201ENST00000516208 104 ntBASIC2.29□□□□□ -2.04
GPC1P35052 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.29□□□□□ -2.04
GPC1P35052 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
GPC1P35052 Y_RNA.12-201ENST00000362393 112 ntBASIC2.28□□□□□ -2.04
GPC1P35052 Y_RNA.536-201ENST00000384621 113 ntBASIC2.28□□□□□ -2.04
GPC1P35052 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
GPC1P35052 SNORD100-201ENST00000408573 76 ntBASIC2.28□□□□□ -2.04
GPC1P35052 AL133373.1-201ENST00000497098 94 ntBASIC2.28□□□□□ -2.04
GPC1P35052 RNU6-303P-201ENST00000517091 106 ntBASIC2.28□□□□□ -2.04
GPC1P35052 AC013244.2-201ENST00000603396 103 ntBASIC2.28□□□□□ -2.04
GPC1P35052 MIR6817-201ENST00000615588 66 ntBASIC2.28□□□□□ -2.04
GPC1P35052 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
GPC1P35052 AL596028.1-201ENST00000326971 197 ntBASIC2.27□□□□□ -2.05
GPC1P35052 RNA5SP68-201ENST00000363885 119 ntBASIC2.27□□□□□ -2.05
GPC1P35052 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
GPC1P35052 TRAJ51-201ENST00000504127 63 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms