Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VARSP26640 MIRLET7F1-201ENST00000362202 87 ntBASIC2.61□□□□□ -1.99
VARSP26640 MIR1261-201ENST00000408659 82 ntBASIC2.61□□□□□ -1.99
VARSP26640 MIR1302-7-201ENST00000408841 72 ntBASIC2.61□□□□□ -1.99
VARSP26640 RNU6-1165P-201ENST00000410119 107 ntBASIC2.61□□□□□ -1.99
VARSP26640 RNU2-19P-201ENST00000517288 84 ntBASIC2.61□□□□□ -1.99
VARSP26640 SNORD92-201ENST00000585078 85 ntBASIC2.61□□□□□ -1.99
VARSP26640 AC067747.1-201ENST00000608026 250 ntBASIC2.61□□□□□ -1.99
VARSP26640 MIR664A-201ENST00000626086 82 ntBASIC2.61□□□□□ -1.99
VARSP26640 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
VARSP26640 SNORA25.3-201ENST00000363205 127 ntBASIC2.6□□□□□ -1.99
VARSP26640 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VARSP26640 RNU6-205P-201ENST00000390858 107 ntBASIC2.6□□□□□ -1.99
VARSP26640 RNA5SP450-201ENST00000411206 102 ntBASIC2.6□□□□□ -1.99
VARSP26640 RNU6-634P-201ENST00000459134 106 ntBASIC2.6□□□□□ -1.99
VARSP26640 RNU7-106P-201ENST00000459514 67 ntBASIC2.6□□□□□ -1.99
VARSP26640 RNU6-237P-201ENST00000515985 71 ntBASIC2.6□□□□□ -1.99
VARSP26640 RNU6-922P-201ENST00000516753 99 ntBASIC2.6□□□□□ -1.99
VARSP26640 AC121758.2-201ENST00000553271 193 ntBASIC2.6□□□□□ -1.99
VARSP26640 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VARSP26640 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
VARSP26640 MIR520H-201ENST00000385126 88 ntBASIC2.59□□□□□ -1.99
VARSP26640 MIR513A1-201ENST00000385138 129 ntBASIC2.59□□□□□ -1.99
VARSP26640 SNORD41-201ENST00000386967 70 ntBASIC2.59□□□□□ -1.99
VARSP26640 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VARSP26640 RNA5SP21-201ENST00000410917 96 ntBASIC2.59□□□□□ -1.99
VARSP26640 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.59□□□□□ -1.99
VARSP26640 MIR4264-201ENST00000583520 66 ntBASIC2.59□□□□□ -1.99
VARSP26640 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.59□□□□□ -1.99
VARSP26640 RNA5SP432-201ENST00000362480 116 ntBASIC2.58□□□□□ -2
VARSP26640 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.58□□□□□ -2
VARSP26640 RNU7-62P-201ENST00000458856 62 ntBASIC2.58□□□□□ -2
VARSP26640 AC055731.1-201ENST00000474387 401 ntBASIC2.58□□□□□ -2
VARSP26640 RNU6-531P-201ENST00000516694 104 ntBASIC2.58□□□□□ -2
VARSP26640 RNU6-303P-201ENST00000517091 106 ntBASIC2.58□□□□□ -2
VARSP26640 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
VARSP26640 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
VARSP26640 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VARSP26640 RNU5F-1-201ENST00000362507 117 ntBASIC2.57□□□□□ -2
VARSP26640 RNU6-957P-201ENST00000363652 99 ntBASIC2.57□□□□□ -2
VARSP26640 RNU6-649P-201ENST00000384463 107 ntBASIC2.57□□□□□ -2
VARSP26640 SNORD90-201ENST00000391145 111 ntBASIC2.57□□□□□ -2
VARSP26640 AC108938.1-201ENST00000451204 136 ntBASIC2.57□□□□□ -2
VARSP26640 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.57□□□□□ -2
VARSP26640 RNU6-587P-201ENST00000391282 106 ntBASIC2.56□□□□□ -2
VARSP26640 MIR1265-201ENST00000408444 86 ntBASIC2.56□□□□□ -2
VARSP26640 SNORD63B-201ENST00000411005 70 ntBASIC2.56□□□□□ -2
VARSP26640 uc_338.6-201ENST00000613544 171 ntBASIC2.56□□□□□ -2
VARSP26640 Y_RNA.12-201ENST00000362393 112 ntBASIC2.55□□□□□ -2
VARSP26640 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.55□□□□□ -2
VARSP26640 MIR504-201ENST00000385065 83 ntBASIC2.55□□□□□ -2
VARSP26640 MIR518E-201ENST00000385252 88 ntBASIC2.55□□□□□ -2
VARSP26640 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
VARSP26640 SNORD30.1-201ENST00000391309 70 ntBASIC2.55□□□□□ -2
VARSP26640 SNORA25.16-201ENST00000516741 121 ntBASIC2.55□□□□□ -2
VARSP26640 RNU4-58P-201ENST00000363192 141 ntBASIC2.54□□□□□ -2
VARSP26640 RNU6-53P-201ENST00000365367 106 ntBASIC2.54□□□□□ -2
VARSP26640 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
VARSP26640 MT-TF-201ENST00000387314 71 ntBASIC2.54□□□□□ -2
VARSP26640 Y_RNA.596-201ENST00000410462 109 ntBASIC2.54□□□□□ -2
VARSP26640 AC074348.1-201ENST00000426503 132 ntBASIC2.54□□□□□ -2
VARSP26640 RNA5SP24-201ENST00000516478 95 ntBASIC2.54□□□□□ -2
VARSP26640 MIR4491-201ENST00000581087 68 ntBASIC2.54□□□□□ -2
VARSP26640 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.54□□□□□ -2
VARSP26640 RNA5SP68-201ENST00000363885 119 ntBASIC2.53□□□□□ -2
VARSP26640 MIR2115-201ENST00000516657 100 ntBASIC2.53□□□□□ -2
VARSP26640 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.53□□□□□ -2
VARSP26640 YWHAEP2-201ENST00000580066 112 ntBASIC2.53□□□□□ -2
VARSP26640 YWHAEP3-201ENST00000582767 121 ntBASIC2.53□□□□□ -2
VARSP26640 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
VARSP26640 U4.3-201ENST00000621047 82 ntBASIC2.53□□□□□ -2
VARSP26640 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VARSP26640 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
VARSP26640 Y_RNA.386-201ENST00000383913 105 ntBASIC2.52□□□□□ -2.01
VARSP26640 RNU2-59P-201ENST00000410482 191 ntBASIC2.52□□□□□ -2.01
VARSP26640 AL161935.2-201ENST00000414627 60 ntBASIC2.52□□□□□ -2.01
VARSP26640 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.52□□□□□ -2.01
VARSP26640 RN7SL274P-201ENST00000492268 272 ntBASIC2.52□□□□□ -2.01
VARSP26640 RNU6-947P-201ENST00000516264 106 ntBASIC2.52□□□□□ -2.01
VARSP26640 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
VARSP26640 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VARSP26640 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VARSP26640 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
VARSP26640 RNU6-540P-201ENST00000384622 101 ntBASIC2.51□□□□□ -2.01
VARSP26640 MT-TN-201ENST00000387400 73 ntBASIC2.51□□□□□ -2.01
VARSP26640 SNORD93-201ENST00000408813 74 ntBASIC2.51□□□□□ -2.01
VARSP26640 RPL30P7-201ENST00000479312 323 ntBASIC2.51□□□□□ -2.01
VARSP26640 RNU6-1194P-201ENST00000516208 104 ntBASIC2.51□□□□□ -2.01
VARSP26640 SNORD53-201ENST00000579969 78 ntBASIC2.51□□□□□ -2.01
VARSP26640 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VARSP26640 SNORA8.1-201ENST00000384250 140 ntBASIC2.5□□□□□ -2.01
VARSP26640 RNU6-1241P-201ENST00000384536 107 ntBASIC2.5□□□□□ -2.01
VARSP26640 MIR154-201ENST00000385243 84 ntBASIC2.5□□□□□ -2.01
VARSP26640 snoU13.17-201ENST00000458802 104 ntBASIC2.5□□□□□ -2.01
VARSP26640 snoU13.26-201ENST00000459452 105 ntBASIC2.5□□□□□ -2.01
VARSP26640 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
VARSP26640 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.5□□□□□ -2.01
VARSP26640 U8.2-201ENST00000363156 134 ntBASIC2.49□□□□□ -2.01
VARSP26640 RNU6-403P-201ENST00000363163 104 ntBASIC2.49□□□□□ -2.01
VARSP26640 SNORA67.4-201ENST00000384688 142 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms