Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU6-675P-201ENST00000384236 104 ntBASIC1.63□□□□□ -2.15
POLR2AP24928 MT-TN-201ENST00000387400 73 ntBASIC1.63□□□□□ -2.15
POLR2AP24928 BX276092.1-201ENST00000427368 251 ntBASIC1.63□□□□□ -2.15
POLR2AP24928 AC055731.1-201ENST00000474387 401 ntBASIC1.63□□□□□ -2.15
POLR2AP24928 RNU7-6P-201ENST00000516845 62 ntBASIC1.63□□□□□ -2.15
POLR2AP24928 AC062037.1-201ENST00000605302 128 ntBASIC1.63□□□□□ -2.15
POLR2AP24928 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
POLR2AP24928 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
POLR2AP24928 RNU6-296P-201ENST00000384608 107 ntBASIC1.62□□□□□ -2.15
POLR2AP24928 MIR514B-201ENST00000516774 80 ntBASIC1.62□□□□□ -2.15
POLR2AP24928 MIR4713-201ENST00000582691 75 ntBASIC1.62□□□□□ -2.15
POLR2AP24928 SNORA18-201ENST00000384416 132 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 RNU6-1086P-201ENST00000410930 100 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.61□□□□□ -2.15
POLR2AP24928 RNU7-2P-201ENST00000516096 62 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 Y_RNA.705-201ENST00000516862 110 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 SEPT14P17-201ENST00000617978 177 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 ICE2P2-201ENST00000483823 2787 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
POLR2AP24928 RNU6-1237P-201ENST00000384777 107 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 MIR4439-201ENST00000583746 80 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 U7.3-201ENST00000616123 62 ntBASIC1.61□□□□□ -2.15
POLR2AP24928 Y_RNA.342-201ENST00000365352 113 ntBASIC1.6□□□□□ -2.15
POLR2AP24928 MIR4777-201ENST00000583710 86 ntBASIC1.6□□□□□ -2.15
POLR2AP24928 MIR6740-201ENST00000618268 113 ntBASIC1.6□□□□□ -2.15
POLR2AP24928 Y_RNA.377-201ENST00000365644 108 ntBASIC1.59□□□□□ -2.15
POLR2AP24928 RNU6-1054P-201ENST00000411293 104 ntBASIC1.59□□□□□ -2.15
POLR2AP24928 AC087343.1-201ENST00000477341 475 ntBASIC1.59□□□□□ -2.15
POLR2AP24928 PVT1_3.1-201ENST00000620853 95 ntBASIC1.59□□□□□ -2.15
POLR2AP24928 MIR6841-201ENST00000637129 72 ntBASIC1.59□□□□□ -2.15
POLR2AP24928 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
POLR2AP24928 Y_RNA.467-201ENST00000384297 102 ntBASIC1.59□□□□□ -2.16
POLR2AP24928 RNU7-45P-201ENST00000459460 63 ntBASIC1.59□□□□□ -2.16
POLR2AP24928 AC133485.1-201ENST00000567176 124 ntBASIC1.59□□□□□ -2.16
POLR2AP24928 AL078603.1-201ENST00000603824 313 ntBASIC1.59□□□□□ -2.16
POLR2AP24928 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.16
POLR2AP24928 RNU6-228P-201ENST00000362700 106 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 RNY1P13-201ENST00000365030 105 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 MIR488-201ENST00000365739 83 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 SNORA48.1-201ENST00000390879 135 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 MIR1302-7-201ENST00000408841 72 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 Y_RNA.685-201ENST00000516532 108 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 RNU6-1006P-201ENST00000516998 103 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 MIR151B-201ENST00000584249 96 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 MIR376B-201ENST00000614515 100 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 MIR4251-201ENST00000635819 61 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
POLR2AP24928 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
POLR2AP24928 SNORD38.2-201ENST00000384470 69 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 RNU2-40P-201ENST00000410833 196 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 HMGN1P33-201ENST00000432945 451 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 UBL5P1-201ENST00000507979 193 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 RNU7-79P-201ENST00000516082 62 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 RNU6-521P-201ENST00000516663 105 ntBASIC1.58□□□□□ -2.16
POLR2AP24928 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
POLR2AP24928 AL161935.2-201ENST00000414627 60 ntBASIC1.57□□□□□ -2.16
POLR2AP24928 RNU7-171P-201ENST00000459581 62 ntBASIC1.57□□□□□ -2.16
POLR2AP24928 RNU7-41P-201ENST00000515917 61 ntBASIC1.57□□□□□ -2.16
POLR2AP24928 Y_RNA.168-201ENST00000363740 102 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 Y_RNA.205-201ENST00000364128 113 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 JTBP1-201ENST00000441314 247 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 RPL39P39-201ENST00000455840 151 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 AC079140.2-201ENST00000506193 142 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 MIR548AE2-201ENST00000583456 67 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 AP000753.3-201ENST00000604083 169 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 SNORD38.1-201ENST00000363863 68 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 RNU6-279P-201ENST00000391297 101 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 AC244023.1-201ENST00000426884 112 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 RNA5SP395-201ENST00000516567 118 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.56□□□□□ -2.16
POLR2AP24928 AC242498.1-201ENST00000604134 111 ntBASIC1.56□□□□□ -2.16
POLR2AP24928 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.56□□□□□ -2.16
POLR2AP24928 SNORA22.1-201ENST00000362701 134 ntBASIC1.55□□□□□ -2.16
POLR2AP24928 RNU6-913P-201ENST00000390913 95 ntBASIC1.55□□□□□ -2.16
POLR2AP24928 snoU13.25-201ENST00000458945 104 ntBASIC1.55□□□□□ -2.16
POLR2AP24928 RNA5SP233-201ENST00000459153 113 ntBASIC1.55□□□□□ -2.16
POLR2AP24928 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.55□□□□□ -2.16
POLR2AP24928 RNU6-90P-201ENST00000606352 106 ntBASIC1.55□□□□□ -2.16
POLR2AP24928 Y_RNA.95-201ENST00000363079 95 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 SUMO2P12-201ENST00000405924 140 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 RPS27P16-201ENST00000425758 201 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 SNORD123-201ENST00000459473 70 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.54□□□□□ -2.16
POLR2AP24928 RNU6-109P-201ENST00000516364 107 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 RNU6-184P-201ENST00000516514 107 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 AP003327.1-201ENST00000529684 127 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.54□□□□□ -2.16
POLR2AP24928 MIR5194-201ENST00000582634 120 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 MIR3202-2-201ENST00000635980 79 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
POLR2AP24928 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
POLR2AP24928 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
POLR2AP24928 Y_RNA.36-201ENST00000362602 112 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 RNU1-52P-201ENST00000384190 164 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 RNU6-679P-201ENST00000391003 106 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 RNU6-1190P-201ENST00000410811 104 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 RPL31P63-201ENST00000422565 375 ntBASIC1.54□□□□□ -2.16
POLR2AP24928 AC004941.2-201ENST00000427009 228 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms